G169121



Basic Information


Item Value
gene id G169121
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 62772689 ~ 62773024 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU192519
GTCAACATGCAATAACACCTGTAAATCCTGTATTCTGCCAATCAATGAGATTGACAGTCTAGCAATGCTGGCTTCATTAAAAACTGTTAAAAAACTGGCAATGAGGCCTTTCATCTACTTCTTGTGAGTCAGATGagctcgtggataccatttttatgtctctgtgtccagtatgaaggaagttagaggtagttttgtgagccaatgctaactagcattagtgcaatgactggaagtctataggTATCTATCTAGCAGATACCCGTAGACTTCAAGTCATTGCACTAACGCTAGATAGCAATTGCGCTAGCGTTAGTTAGGAAGTTCCTTCAAACT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU192519 True 336 lncRNA 0.40 1 62772689 62773024
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110493442 yars2 coding upstream 34775 62723445 ~ 62737914 (+)
pparab ppara coding upstream 68863 62640508 ~ 62704574 (+)
LOC110493430 NA coding upstream 153852 62562183 ~ 62618837 (+)
LOC118941151 NA coding upstream 241703 62520532 ~ 62530986 (+)
fbln1 fbln1 coding upstream 403381 62283204 ~ 62369308 (+)
LOC118941152 NA coding downstream 153722 62926746 ~ 62927472 (+)
mrps35 LOC106560988 coding downstream 234299 63007323 ~ 63022862 (+)
LOC110493518 pus7 coding downstream 453146 63226170 ~ 63238260 (+)
hdac10 hdac10 coding downstream 466028 63239052 ~ 63248916 (+)
parvb parvb coding downstream 476465 63249489 ~ 63262311 (+)
G169117 NA non-coding upstream 1543 62770746 ~ 62771146 (+)
G169118 NA non-coding upstream 2385 62770043 ~ 62770304 (+)
G169115 NA non-coding upstream 6319 62766140 ~ 62766370 (+)
G169114 NA non-coding upstream 7841 62764644 ~ 62764848 (+)
G169108 NA non-coding upstream 12032 62760356 ~ 62760657 (+)
G169124 NA non-coding downstream 2495 62775519 ~ 62776100 (+)
G169129 NA non-coding downstream 11886 62784910 ~ 62785290 (+)
G169131 NA non-coding downstream 12976 62786000 ~ 62786222 (+)
G169169 NA non-coding downstream 51153 62824177 ~ 62824388 (+)
G169174 NA non-coding downstream 58759 62831783 ~ 62831991 (+)
LOC118936783 LOC106560954 other upstream 892265 61870393 ~ 61880657 (+)
G167609 LOC106560954 other upstream 1045235 61726959 ~ 61727454 (+)
LOC110510683 LOC106560954 other upstream 1240362 61525283 ~ 61535728 (+)
G167325 LOC106561003 other upstream 1540144 61232196 ~ 61232545 (+)
G167288 NA other upstream 1698098 61062593 ~ 61074591 (+)
G169130 NA other downstream 12334 62785358 ~ 62785643 (+)
G170131 NA other downstream 1047437 63820461 ~ 63830320 (+)
G170150 LOC106560975 other downstream 1100224 63873248 ~ 63878233 (+)
map1lc3b map1lc3b other downstream 2758122 65531126 ~ 65536787 (+)
jph3 jph3 other downstream 2820493 65593468 ~ 65648660 (+)

Expression


G169121 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
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G169121 Expression in each Bioproject

Bar chart with 15 bars.
G169121 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 125.
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Co-expression Network