Gene
RNA
| Item | Value |
|---|---|
| gene id | G169577 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 62977024 ~ 62977316 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU192999 | True | 293 | lncRNA | 0.44 | 1 | 62977024 | 62977316 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941152 | NA | coding | upstream | 49552 | 62926746 ~ 62927472 (+) |
| LOC110493442 | yars2 | coding | upstream | 239110 | 62723445 ~ 62737914 (+) |
| pparab | ppara | coding | upstream | 273198 | 62640508 ~ 62704574 (+) |
| LOC110493430 | NA | coding | upstream | 358187 | 62562183 ~ 62618837 (+) |
| LOC118941151 | NA | coding | upstream | 446038 | 62520532 ~ 62530986 (+) |
| mrps35 | LOC106560988 | coding | downstream | 30007 | 63007323 ~ 63022862 (+) |
| LOC110493518 | pus7 | coding | downstream | 248854 | 63226170 ~ 63238260 (+) |
| hdac10 | hdac10 | coding | downstream | 261736 | 63239052 ~ 63248916 (+) |
| parvb | parvb | coding | downstream | 272173 | 63249489 ~ 63262311 (+) |
| parvg | parvg | coding | downstream | 285462 | 63262778 ~ 63275177 (+) |
| G169242 | NA | non-coding | upstream | 24002 | 62952563 ~ 62953022 (+) |
| G169217 | NA | non-coding | upstream | 57300 | 62919509 ~ 62919724 (+) |
| G169174 | NA | non-coding | upstream | 145033 | 62831783 ~ 62831991 (+) |
| G169169 | NA | non-coding | upstream | 152636 | 62824177 ~ 62824388 (+) |
| G169131 | NA | non-coding | upstream | 190802 | 62786000 ~ 62786222 (+) |
| G169592 | NA | non-coding | downstream | 10698 | 62988014 ~ 62988243 (+) |
| G169603 | NA | non-coding | downstream | 18690 | 62996006 ~ 62996246 (+) |
| G169611 | NA | non-coding | downstream | 24797 | 63002113 ~ 63002439 (+) |
| G169613 | NA | non-coding | downstream | 25238 | 63002554 ~ 63002764 (+) |
| G169641 | NA | non-coding | downstream | 48967 | 63026283 ~ 63026490 (+) |
| G169130 | NA | other | upstream | 191381 | 62785358 ~ 62785643 (+) |
| LOC118936783 | LOC106560954 | other | upstream | 1096600 | 61870393 ~ 61880657 (+) |
| G167609 | LOC106560954 | other | upstream | 1249570 | 61726959 ~ 61727454 (+) |
| LOC110510683 | LOC106560954 | other | upstream | 1444697 | 61525283 ~ 61535728 (+) |
| G167325 | LOC106561003 | other | upstream | 1744479 | 61232196 ~ 61232545 (+) |
| G170131 | NA | other | downstream | 843145 | 63820461 ~ 63830320 (+) |
| G170150 | LOC106560975 | other | downstream | 895932 | 63873248 ~ 63878233 (+) |
| map1lc3b | map1lc3b | other | downstream | 2553830 | 65531126 ~ 65536787 (+) |
| jph3 | jph3 | other | downstream | 2616201 | 65593468 ~ 65648660 (+) |
| G172639 | NA | other | downstream | 2958280 | 65935596 ~ 65936133 (+) |
