G169613


Basic Information

Item Value
gene id G169613
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 63002554 ~ 63002764 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU193035
ggacaaagaataaaaggagcagatttctgggcgtggtagaatatattcagggcataatgcgcagacaggggtatggtggggtgcgggtacagcggaggtaagcccaggcactgggtgatgataagagaggttgtatcacTGGACATGTTGGTTGTAATGGGTAAggtgcatgtgtgggaggtgggacaaaggaggtatcagaggtatgaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193035 True 211 lncRNA 0.50 1 63002554 63002764

Neighbor

gene id symbol gene type direction distance location
LOC118941152 NA coding upstream 75082 62926746 ~ 62927472 (+)
LOC110493442 yars2 coding upstream 264640 62723445 ~ 62737914 (+)
pparab ppara coding upstream 298728 62640508 ~ 62704574 (+)
LOC110493430 NA coding upstream 383717 62562183 ~ 62618837 (+)
LOC118941151 NA coding upstream 471568 62520532 ~ 62530986 (+)
mrps35 LOC106560988 coding downstream 4559 63007323 ~ 63022862 (+)
LOC110493518 pus7 coding downstream 223406 63226170 ~ 63238260 (+)
hdac10 hdac10 coding downstream 236288 63239052 ~ 63248916 (+)
parvb parvb coding downstream 246725 63249489 ~ 63262311 (+)
parvg parvg coding downstream 260014 63262778 ~ 63275177 (+)
G169611 NA non-coding upstream 115 63002113 ~ 63002439 (+)
G169603 NA non-coding upstream 6308 62996006 ~ 62996246 (+)
G169592 NA non-coding upstream 14311 62988014 ~ 62988243 (+)
G169577 NA non-coding upstream 25238 62977024 ~ 62977316 (+)
G169242 NA non-coding upstream 49532 62952563 ~ 62953022 (+)
G169641 NA non-coding downstream 23519 63026283 ~ 63026490 (+)
G169646 NA non-coding downstream 27585 63030349 ~ 63030556 (+)
G169651 LOC106560987 non-coding downstream 33891 63036655 ~ 63037957 (+)
G169653 NA non-coding downstream 38934 63041698 ~ 63042006 (+)
G169654 NA non-coding downstream 39825 63042589 ~ 63042801 (+)
G169130 NA other upstream 216911 62785358 ~ 62785643 (+)
LOC118936783 LOC106560954 other upstream 1122130 61870393 ~ 61880657 (+)
G167609 LOC106560954 other upstream 1275100 61726959 ~ 61727454 (+)
LOC110510683 LOC106560954 other upstream 1470227 61525283 ~ 61535728 (+)
G167325 LOC106561003 other upstream 1770009 61232196 ~ 61232545 (+)
G170131 NA other downstream 817697 63820461 ~ 63830320 (+)
G170150 LOC106560975 other downstream 870484 63873248 ~ 63878233 (+)
map1lc3b map1lc3b other downstream 2528382 65531126 ~ 65536787 (+)
jph3 jph3 other downstream 2590753 65593468 ~ 65648660 (+)
G172639 NA other downstream 2932832 65935596 ~ 65936133 (+)

Expression


Co-expression Network