G169646


Basic Information

Item Value
gene id G169646
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 63030349 ~ 63030556 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU193069
cctttgcaccccattatttttatttctactttgcactttgcacattcttccattgcaaatctaccattccagtgttttacttgctatattgtatttactttgccaccatggcctttttttgcctctacctcccttatctcacctcatttgctcacatcgtatttagacttgtttatactgtattattgactgtatgtttgttttactc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193069 True 208 lncRNA 0.36 1 63030349 63030556

Neighbor

gene id symbol gene type direction distance location
mrps35 LOC106560988 coding upstream 7487 63007323 ~ 63022862 (+)
LOC118941152 NA coding upstream 102877 62926746 ~ 62927472 (+)
LOC110493442 yars2 coding upstream 292435 62723445 ~ 62737914 (+)
pparab ppara coding upstream 326523 62640508 ~ 62704574 (+)
LOC110493430 NA coding upstream 411512 62562183 ~ 62618837 (+)
LOC110493518 pus7 coding downstream 195614 63226170 ~ 63238260 (+)
hdac10 hdac10 coding downstream 208496 63239052 ~ 63248916 (+)
parvb parvb coding downstream 218933 63249489 ~ 63262311 (+)
parvg parvg coding downstream 232222 63262778 ~ 63275177 (+)
plxnb2b LOC106560979 coding downstream 495226 63525782 ~ 63710132 (+)
G169641 NA non-coding upstream 3859 63026283 ~ 63026490 (+)
G169613 NA non-coding upstream 27585 63002554 ~ 63002764 (+)
G169611 NA non-coding upstream 27910 63002113 ~ 63002439 (+)
G169603 NA non-coding upstream 34103 62996006 ~ 62996246 (+)
G169592 NA non-coding upstream 42106 62988014 ~ 62988243 (+)
G169651 LOC106560987 non-coding downstream 6099 63036655 ~ 63037957 (+)
G169653 NA non-coding downstream 11142 63041698 ~ 63042006 (+)
G169654 NA non-coding downstream 12033 63042589 ~ 63042801 (+)
G169655 NA non-coding downstream 13333 63043889 ~ 63044095 (+)
G169675 NA non-coding downstream 20793 63051349 ~ 63051560 (+)
G169130 NA other upstream 244706 62785358 ~ 62785643 (+)
LOC118936783 LOC106560954 other upstream 1149925 61870393 ~ 61880657 (+)
G167609 LOC106560954 other upstream 1302895 61726959 ~ 61727454 (+)
LOC110510683 LOC106560954 other upstream 1498022 61525283 ~ 61535728 (+)
G167325 LOC106561003 other upstream 1797804 61232196 ~ 61232545 (+)
G170131 NA other downstream 789905 63820461 ~ 63830320 (+)
G170150 LOC106560975 other downstream 842692 63873248 ~ 63878233 (+)
map1lc3b map1lc3b other downstream 2500590 65531126 ~ 65536787 (+)
jph3 jph3 other downstream 2562961 65593468 ~ 65648660 (+)
G172639 NA other downstream 2905040 65935596 ~ 65936133 (+)

Expression


Co-expression Network