G169653


Basic Information

Item Value
gene id G169653
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 63041698 ~ 63042006 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU193077
acagccttgagtcttcttgggtatgacgccacaagcttggcacacctgtatttggggagtttctcccattcttctctgcagatcctctcaagctctgtcaggttggatggggagcgtcgctgcacagctatttttaggtctctccagatatgttcgatcggcttcaagtccaggctctggctgcgcCTCTCAAGGatattgagacttgtcccgaagtcactcctacttgtcttggctgtgtgctcagggttgttgtcctgttggaaggtgaaccttcaccccagtctgaggtcctgagcgctctggagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193077 True 309 lncRNA 0.53 1 63041698 63042006

Neighbor

gene id symbol gene type direction distance location
mrps35 LOC106560988 coding upstream 18836 63007323 ~ 63022862 (+)
LOC118941152 NA coding upstream 114226 62926746 ~ 62927472 (+)
LOC110493442 yars2 coding upstream 303784 62723445 ~ 62737914 (+)
pparab ppara coding upstream 337872 62640508 ~ 62704574 (+)
LOC110493430 NA coding upstream 422861 62562183 ~ 62618837 (+)
LOC110493518 pus7 coding downstream 184164 63226170 ~ 63238260 (+)
hdac10 hdac10 coding downstream 197046 63239052 ~ 63248916 (+)
parvb parvb coding downstream 207483 63249489 ~ 63262311 (+)
parvg parvg coding downstream 220772 63262778 ~ 63275177 (+)
plxnb2b LOC106560979 coding downstream 483776 63525782 ~ 63710132 (+)
G169651 LOC106560987 non-coding upstream 3741 63036655 ~ 63037957 (+)
G169646 NA non-coding upstream 11142 63030349 ~ 63030556 (+)
G169641 NA non-coding upstream 15208 63026283 ~ 63026490 (+)
G169613 NA non-coding upstream 38934 63002554 ~ 63002764 (+)
G169611 NA non-coding upstream 39259 63002113 ~ 63002439 (+)
G169654 NA non-coding downstream 583 63042589 ~ 63042801 (+)
G169655 NA non-coding downstream 1883 63043889 ~ 63044095 (+)
G169675 NA non-coding downstream 9343 63051349 ~ 63051560 (+)
G169711 NA non-coding downstream 53093 63095099 ~ 63150059 (+)
G169712 NA non-coding downstream 110141 63152147 ~ 63155789 (+)
G169130 NA other upstream 256055 62785358 ~ 62785643 (+)
LOC118936783 LOC106560954 other upstream 1161274 61870393 ~ 61880657 (+)
G167609 LOC106560954 other upstream 1314244 61726959 ~ 61727454 (+)
LOC110510683 LOC106560954 other upstream 1509371 61525283 ~ 61535728 (+)
G167325 LOC106561003 other upstream 1809153 61232196 ~ 61232545 (+)
G170131 NA other downstream 778455 63820461 ~ 63830320 (+)
G170150 LOC106560975 other downstream 831242 63873248 ~ 63878233 (+)
map1lc3b map1lc3b other downstream 2489140 65531126 ~ 65536787 (+)
jph3 jph3 other downstream 2551511 65593468 ~ 65648660 (+)
G172639 NA other downstream 2893590 65935596 ~ 65936133 (+)

Expression


Co-expression Network