G169673


Basic Information

Item Value
gene id G169673
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 63047642 ~ 63048966 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU193097
acattgtagaataatagtgaagatataaaaactatgaaataacacatacatcatgtagtaaccagaaaagggtatattttatatttgagattcttcaaagtagccaccctttgccttgatgacagctttgcacactctttagcattctctcaaccagcatcatgaggtattcacctggaatgcattcaattaacaggtgtgccttgttaatttgtggaatttatttccttcttaatgcatttgccaatcagttgtgttgtgacaaggtaggggtggtatacagaagatagccctatttggtaaaagaccaagtccatattatggcaagaacagctcaaataagcaaagagaaacaacagtccatcattactttaaaacatgaaggtcagtcaatctggaacatttcaagaactaaaaaccatcaagcgctatgatgaaactggctctcatgagaactaccataggaaaggaagacccagagttacctctgctgcagaggataagttcactagagttaccagcctcagaaattgcagcccaaataaatgcatcacagagttcaagtaaaatacacatctcaacatcaactgttcagaagagactgtgtgattcaggccttcatggtcgaattgctgcaaagaaaccactcctaaaggacaccaataagaagagacttgttcgggccaagaaacacgagaaatggacatgttagatttttggttccaaacgttgtctgtgaaacgcagagtaggtgaacggatgatctccgcatgtgttgttcccaccgtaaagcgtggaggaggtgtgatgatgtgggggtactttgctggtgacactaagATTTACTtcgaattcaagtcacacttaaccagaatggctaccacagcattctgcagcgatacgccattccatctggtttgcgcttagtggggctatcatttgtttttcaacaagacaatgacccaacacacctccaggctatgtaagggctatttgactaagaaggagagtgatggggtgctgcatcagatgacctggcctccacaatcacccgacctcaacccaatcgagatggtttgggatgagttggaccacagagtgaaagaaaagcagccaacaagtgctacgcttatgtgggaactccttcaagacttctggaaaagcattccaggtgaagctggttgagagaatgtcaagagtgtgcaaagctttcaccAAGgcaaggctggctactttgaaaaatctcaaatatatcttgatttctttaacactttttcagtcactacatgattccatgtgtgttatttcatagttttgatgtcttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193097 True 1325 lncRNA 0.42 1 63047642 63048966

Neighbor

gene id symbol gene type direction distance location
LOC110493479 LOC106560987 coding downstream 7133 63036389 ~ 63040509 (-)
LOC118941153 mansc4 coding downstream 21861 63022968 ~ 63025781 (-)
LOC110501769 LOC106560953 coding downstream 48872 62955119 ~ 62998770 (-)
LOC110493460 LOC106560989 coding downstream 169508 62749004 ~ 62878134 (-)
wnt7bb LOC106560992 coding downstream 539232 62471244 ~ 62508410 (-)
LOC110501771 NA coding upstream 2379 63051345 ~ 63053275 (-)
LOC110493488 LOC105029403 coding upstream 9088 63058054 ~ 63089778 (-)
si:dkey-82f1.1 LOC106560985 coding upstream 41394 63090360 ~ 63130536 (-)
LOC110493507 LOC106560984 coding upstream 97803 63146769 ~ 63224837 (-)
shisal1b kiaa1644 coding upstream 235016 63282662 ~ 63351175 (-)
G169671 NA non-coding downstream 673 63046764 ~ 63046969 (-)
G169663 NA non-coding downstream 8959 63038228 ~ 63038683 (-)
G169643 NA non-coding downstream 20397 63026960 ~ 63027245 (-)
G169612 NA non-coding downstream 45475 63001932 ~ 63002167 (-)
G170268 parvb non-coding upstream 202436 63251402 ~ 63259031 (-)
G170356 NA non-coding upstream 460641 63509607 ~ 63904078 (-)
G170451 NA non-coding upstream 548863 63597829 ~ 63631175 (-)
G170526 NA non-coding upstream 618922 63667888 ~ 63668507 (-)
G168141 NA other downstream 1531986 61515237 ~ 61515656 (-)
G168078 NA other downstream 1555971 61490434 ~ 61491671 (-)
LOC110493186 mlkl other downstream 1747550 61290149 ~ 61303507 (-)
G168021 NA other downstream 1791627 61254512 ~ 61256015 (-)
G167866 NA other downstream 2072621 60974762 ~ 60975021 (-)
LOC110501772 LOC106560973 other upstream 910557 63958607 ~ 63963969 (-)
tmem117 LOC106573612 other upstream 1116997 64102056 ~ 64170220 (-)
G172141 NA other upstream 2036606 65085572 ~ 65086188 (-)
G173121 NA other upstream 2334471 65383437 ~ 65383873 (-)

Expression


Co-expression Network