Gene
RNA
| Item | Value |
|---|---|
| gene id | G169675 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 63051349 ~ 63051560 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU193099 | True | 212 | lncRNA | 0.62 | 1 | 63051349 | 63051560 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mrps35 | LOC106560988 | coding | upstream | 28487 | 63007323 ~ 63022862 (+) |
| LOC118941152 | NA | coding | upstream | 123877 | 62926746 ~ 62927472 (+) |
| LOC110493442 | yars2 | coding | upstream | 313435 | 62723445 ~ 62737914 (+) |
| pparab | ppara | coding | upstream | 347523 | 62640508 ~ 62704574 (+) |
| LOC110493430 | NA | coding | upstream | 432512 | 62562183 ~ 62618837 (+) |
| LOC110493518 | pus7 | coding | downstream | 174610 | 63226170 ~ 63238260 (+) |
| hdac10 | hdac10 | coding | downstream | 187492 | 63239052 ~ 63248916 (+) |
| parvb | parvb | coding | downstream | 197929 | 63249489 ~ 63262311 (+) |
| parvg | parvg | coding | downstream | 211218 | 63262778 ~ 63275177 (+) |
| plxnb2b | LOC106560979 | coding | downstream | 474222 | 63525782 ~ 63710132 (+) |
| G169655 | NA | non-coding | upstream | 7254 | 63043889 ~ 63044095 (+) |
| G169654 | NA | non-coding | upstream | 8548 | 63042589 ~ 63042801 (+) |
| G169653 | NA | non-coding | upstream | 9343 | 63041698 ~ 63042006 (+) |
| G169651 | LOC106560987 | non-coding | upstream | 13392 | 63036655 ~ 63037957 (+) |
| G169646 | NA | non-coding | upstream | 20793 | 63030349 ~ 63030556 (+) |
| G169711 | NA | non-coding | downstream | 43539 | 63095099 ~ 63150059 (+) |
| G169712 | NA | non-coding | downstream | 100587 | 63152147 ~ 63155789 (+) |
| G169765 | NA | non-coding | downstream | 144721 | 63196281 ~ 63291298 (+) |
| G169764 | NA | non-coding | downstream | 228266 | 63279826 ~ 63280420 (+) |
| G170035 | NA | non-coding | downstream | 539289 | 63590849 ~ 63592262 (+) |
| G169130 | NA | other | upstream | 265706 | 62785358 ~ 62785643 (+) |
| LOC118936783 | LOC106560954 | other | upstream | 1170925 | 61870393 ~ 61880657 (+) |
| G167609 | LOC106560954 | other | upstream | 1323895 | 61726959 ~ 61727454 (+) |
| LOC110510683 | LOC106560954 | other | upstream | 1519022 | 61525283 ~ 61535728 (+) |
| G167325 | LOC106561003 | other | upstream | 1818804 | 61232196 ~ 61232545 (+) |
| G170131 | NA | other | downstream | 768901 | 63820461 ~ 63830320 (+) |
| G170150 | LOC106560975 | other | downstream | 821688 | 63873248 ~ 63878233 (+) |
| map1lc3b | map1lc3b | other | downstream | 2479586 | 65531126 ~ 65536787 (+) |
| jph3 | jph3 | other | downstream | 2541957 | 65593468 ~ 65648660 (+) |
| G172639 | NA | other | downstream | 2884036 | 65935596 ~ 65936133 (+) |
