G169765


Basic Information

Item Value
gene id G169765
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 63196281 ~ 63291298 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU193207
gacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaaaatgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctctgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagcgcagagagcatcatgaagaacaag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193207 True 265 lncRNA 0.48 2 63196281 63291298

Neighbor

gene id symbol gene type direction distance location
mrps35 LOC106560988 coding upstream 173419 63007323 ~ 63022862 (+)
LOC118941152 NA coding upstream 268809 62926746 ~ 62927472 (+)
LOC110493442 yars2 coding upstream 458367 62723445 ~ 62737914 (+)
pparab ppara coding upstream 492455 62640508 ~ 62704574 (+)
LOC110493430 NA coding upstream 577444 62562183 ~ 62618837 (+)
plxnb2b LOC106560979 coding downstream 234484 63525782 ~ 63710132 (+)
tubgcp6 tubgcp6 coding downstream 421756 63713054 ~ 63741924 (+)
LOC118941167 NA coding downstream 470434 63761681 ~ 63763204 (+)
LOC110493594 NA coding downstream 475590 63766888 ~ 63787922 (+)
mov10l1 mov10l1 coding downstream 624627 63915925 ~ 63942569 (+)
G169712 NA non-coding upstream 40492 63152147 ~ 63155789 (+)
G169711 NA non-coding upstream 46222 63095099 ~ 63150059 (+)
G169675 NA non-coding upstream 144721 63051349 ~ 63051560 (+)
G169655 NA non-coding upstream 152186 63043889 ~ 63044095 (+)
G169654 NA non-coding upstream 153480 63042589 ~ 63042801 (+)
G170035 NA non-coding downstream 299551 63590849 ~ 63592262 (+)
G170697 NA non-coding downstream 704824 63996122 ~ 63996775 (+)
G169130 NA other upstream 410638 62785358 ~ 62785643 (+)
LOC118936783 LOC106560954 other upstream 1315857 61870393 ~ 61880657 (+)
G167609 LOC106560954 other upstream 1468827 61726959 ~ 61727454 (+)
LOC110510683 LOC106560954 other upstream 1663954 61525283 ~ 61535728 (+)
G167325 LOC106561003 other upstream 1963736 61232196 ~ 61232545 (+)
G170131 NA other downstream 529163 63820461 ~ 63830320 (+)
G170150 LOC106560975 other downstream 581950 63873248 ~ 63878233 (+)
map1lc3b map1lc3b other downstream 2239848 65531126 ~ 65536787 (+)
jph3 jph3 other downstream 2302219 65593468 ~ 65648660 (+)
G172639 NA other downstream 2644298 65935596 ~ 65936133 (+)

Expression


Co-expression Network