G170451


Basic Information

Item Value
gene id G170451
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 63597829 ~ 63631175 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU193940
cagatgtgtttaagagagagagtgcGCGAGAGAAATtgtgcgagagggagagagagagagcgagagggagaaagggggtgagagatggggagagaggatggaaagagggagagagggtgttgtggtgGTAGATaagcgcctcttccccctcaggaagcTAAAATGATTtgacatgggccctcagatcctcaaaaagttctagatctgcaccattgagagcatcttgactggctgcatctcCGCTCGGTACAAAAACTGCAAGGCACCCGACCGTAAAGCGCAACATAGGGAGCagatcactggggccgagctccctgcaatccaggacatttataccaggcagtgtcagaggaaggccccaacaaattgtcaaagactccagccacccaagccatagaatgttctctctgctactgcacggcaatcagtaccaatgcaccaagtctggaaccaataggATCCTGAAAAGCtcctacccccaaaccataacacTGCTAAACAGGACTGCTAAACAGGACTGCTAAACAGGACTGCTAAATAGATGATCAAACAGCTTACCGGACTACCTGCTTTTACCCTGTTTTGAACCATCTCTCTTACACTgaaaccccaacacacacacacacactggactctacccacactgacaccccatcacacacacactggactctacccacactgacaccccaacacacacacactggactctacccacactgacaccccaacacacacacactggactctacccacactgacacccacacacacacacactggactctacccacactctcttacactgacaccccaacacacacacactggactctacccacactaacaccccaaaacacacacactgaactctacccacactgacaccccaacacacacacactggactctacccacactgacaccccaacacacacacactggactctacccacactgacttacactaacaccccaacacacacacactggactctacccacactgacaccccaacacacacacactggactctacccacactgacaccccaacacacacacactggactctacccacactgacttacaatgacaccccaacacacgcagactggactctaccctcactgacaccccaacacacgcagactggactctacccacactgacttacaatgacaccccaacacacgcagactggactctaccctcactgacaccccaacacacgcagactggactctacccacactgacaccccaacacacacacactcgactctacccacactgacaccccaacacacacacacacacacactggactctacccacactgacaccccaacacacacacactggactctacccacactgacttacactgacaccccaacacacacagacactggactctacccacactgacttacactgacaccccaacacacacacacacactggactctacccacactgacaccccaacacacacacactggactctacccacactgacttacactgacaccccaacacacacacacactggactctacccacactaacaccccaacacacacacactggactctacccacactgacaccccaacacacacacactggactctacccacacggacaccccaaaacacacacactggactctacccacactgacaccccaacacacacacactggactctacccacactgacaccccaacacacacacactggactctacccacactgacttacactaacaccccaacacacacacactggactctacccacactgacaccccaacacatacacactggactctacccacactgacaccccaacacacacacactggaccccaacacacacacactggactctacccacactgacaccccaacacacacacactggactctacccacactgacaccccaacacacacacactggactctacccacactgacttacaatgacaccccaacacacacacactggactctacccacactgacaccccaacacacacactggactctacccacactgacttacactgacaccccaacacacacacacactggactctacccacactgacaccccaacacacacacactggactctacccacactgacttacaatgacaccccaacacacacacacactggactctacccacacgaacaccccaaaacacacacactggactctacccacactgacaccccaacacacacacactggactctacccacacggacaccccaaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU193940 True 2287 lncRNA 0.40 2 63597829 63631175

Neighbor

gene id symbol gene type direction distance location
LOC118944230 NA coding downstream 84959 63512730 ~ 63512870 (-)
LOC118944151 NA coding downstream 172973 63424804 ~ 63424856 (-)
shisal1b kiaa1644 coding downstream 246654 63282662 ~ 63351175 (-)
LOC110493507 LOC106560984 coding downstream 372992 63146769 ~ 63224837 (-)
si:dkey-82f1.1 LOC106560985 coding downstream 467293 63090360 ~ 63130536 (-)
LOC118941165 NA coding upstream 86662 63717837 ~ 63718167 (-)
appl2 LOC106560977 coding upstream 113875 63745050 ~ 63761413 (-)
nuak1b LOC106560975 coding upstream 242065 63873240 ~ 63904118 (-)
LOC110501772 LOC106560973 coding upstream 327432 63958607 ~ 63963969 (-)
LOC110501774 NA coding upstream 337554 63968729 ~ 63971324 (-)
G170268 parvb non-coding downstream 338798 63251402 ~ 63259031 (-)
G169673 NA non-coding downstream 548863 63047642 ~ 63048966 (-)
G169671 NA non-coding downstream 550860 63046764 ~ 63046969 (-)
G169663 NA non-coding downstream 559146 63038228 ~ 63038683 (-)
G170526 NA non-coding upstream 36713 63667888 ~ 63668507 (-)
G170528 NA non-coding upstream 38428 63669603 ~ 63670303 (-)
G170551 NA non-coding upstream 72858 63704033 ~ 63704831 (-)
G170569 NA non-coding upstream 100139 63731314 ~ 63731698 (-)
G170520 NA non-coding upstream 102135 63733310 ~ 63735350 (-)
G168141 NA other downstream 2082173 61515237 ~ 61515656 (-)
G168078 NA other downstream 2106158 61490434 ~ 61491671 (-)
LOC110493186 mlkl other downstream 2297737 61290149 ~ 61303507 (-)
G168021 NA other downstream 2341814 61254512 ~ 61256015 (-)
tmem117 LOC106573612 other upstream 534788 64102056 ~ 64170220 (-)
G172141 NA other upstream 1454397 65085572 ~ 65086188 (-)
G173121 NA other upstream 1752262 65383437 ~ 65383873 (-)
zcchc14 zcchc14 other upstream 1903296 65530911 ~ 65571025 (-)

Expression


Co-expression Network