G170526



Basic Information


Item Value
gene id G170526
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 63667888 ~ 63668507 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU194015
TGTCAACCACAAAACACTAGAGCAACTCCACAGATGGAGGCTGGCCCTATCAAGGGCTGTTTAGAGGGACATGGGAGAGAGATACGCTGACCTGGATCTCTGCAGGACATGATTAGGAGCACACAGAGTGTGCGGCTTTCCTGCGTTTTTcttacctgccctccagaacacaCCAGCCACAGTAGGGGTCTCGTGTGGACACACAGGACTGGCAGTCTGTTTTCAGATGGCACGCCTGCACTGGCACCTTGGTGATCTATAGCAGTAGTACACAGACACAAACAAGAGACGCAAACATGTCAGGACTGGGGGTCTGTCGGGACACTGAAATGTCTGTGACGTTGAAATTCACTTTAAAACTGGCACCTTGGAGATCTATAGTATCACACTGTCAACAACACGAACACTAACAGCATGAATGCCTCTAACTGGGATAAACACACAGgggctgtccctttctctctacaGCAATAACAATAACACTGACAAACGGTGGAACTGTTGGGAGGTCGGTACAGAACTTCCTGGAGGACTGTACAGAACGGTAATGGAGGTCGGTACAGAACTTCCTGGAG

Function


NR:

description
plexin-B2-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU194015 True 575 lncRNA 0.43 2 63667888 63668507

Neighbor


gene id symbol gene type direction distance location
LOC118944230 NA coding downstream 155018 63512730 ~ 63512870 (-)
LOC118944151 NA coding downstream 243032 63424804 ~ 63424856 (-)
shisal1b kiaa1644 coding downstream 316713 63282662 ~ 63351175 (-)
LOC110493507 LOC106560984 coding downstream 443051 63146769 ~ 63224837 (-)
si:dkey-82f1.1 LOC106560985 coding downstream 537352 63090360 ~ 63130536 (-)
LOC118941165 NA coding upstream 49330 63717837 ~ 63718167 (-)
appl2 LOC106560977 coding upstream 76543 63745050 ~ 63761413 (-)
nuak1b LOC106560975 coding upstream 204733 63873240 ~ 63904118 (-)
LOC110501772 LOC106560973 coding upstream 290100 63958607 ~ 63963969 (-)
LOC110501774 NA coding upstream 300222 63968729 ~ 63971324 (-)
G170451 NA non-coding downstream 36713 63597829 ~ 63631175 (-)
G170268 parvb non-coding downstream 408857 63251402 ~ 63259031 (-)
G169673 NA non-coding downstream 618922 63047642 ~ 63048966 (-)
G169671 NA non-coding downstream 620919 63046764 ~ 63046969 (-)
G170528 NA non-coding upstream 1096 63669603 ~ 63670303 (-)
G170551 NA non-coding upstream 35526 63704033 ~ 63704831 (-)
G170569 NA non-coding upstream 62807 63731314 ~ 63731698 (-)
G170520 NA non-coding upstream 64803 63733310 ~ 63735350 (-)
G170573 NA non-coding upstream 73396 63741903 ~ 63744286 (-)
G168141 NA other downstream 2152232 61515237 ~ 61515656 (-)
G168078 NA other downstream 2176217 61490434 ~ 61491671 (-)
LOC110493186 mlkl other downstream 2367796 61290149 ~ 61303507 (-)
G168021 NA other downstream 2411873 61254512 ~ 61256015 (-)
tmem117 LOC106573612 other upstream 497456 64102056 ~ 64170220 (-)
G172141 NA other upstream 1417065 65085572 ~ 65086188 (-)
G173121 NA other upstream 1714930 65383437 ~ 65383873 (-)
zcchc14 zcchc14 other upstream 1865964 65530911 ~ 65571025 (-)

Expression



Co-expression Network