G170520


Basic Information

Item Value
gene id G170520
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 63733310 ~ 63735350 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU194009
TACTGCTCCACCTGGTACTGAGCAGCCAGGGAGCGGAGGTACTCCCTCTCTGAGCTCTCGCCTGGGGACAGAGCCAAGCCCGCTGCCCAGGACGAGATGCCCTCGGCCAGCCGCTGCTGCTCCTGTTGCTCCAGGGTCCTGGCGTCGTATTCATTACCAGTCTCCTTCACCTTACAGCCCATCGCTGAATCTGACGAATGGCCGTAGTCACTTCCGGGTATCGGAGAAGGAAGGGTTACCgttcctgacaccacacaccCTCCACCCAGGGTTGAGTCTGAGGCGTGTCCAAAGTCACTTCCAGGTAGAGGAGCATGAAGGAGTTCAACCCCAGAGACAACACACCCTATACCTAGTGTGGACTCAGAGGAATGGCCGTAGGTGCTACCAGGTAAAGGGGAGAGTACTGGTTCTGTGCCAGACATCACACAGCCTACTTGAAGTGTGCAGTCTGAAGCGTGACCATGCTTGCTCCAGCGTGGTCGGGAGGGCTCTGCGTCCAACACAAACTCACCCGCCTTGAAGTGAGTGTCGGATGAATGACCGTGGATGTTTTGGGTGTGAATGGAGGCGACCTCTTCTGACATGTGCTCCCCGACCTTGATGTGAGAGTCCGAGGCATGACCGTGAATGTTCTGGGTGAAAAGGGAGGCGACCACTTCTGAAACATGGTCTCCAACTTTAATATGAGCGTCAGATGCGTGACCGTGAATGTTGGCGGTAGGAAGCTCGTACACACTGGAGGGtccagagagggaaggggaggccTGTCCTGGGTGATACCCACTGTCATGGCCCTGCTCTGGGGTGTAGGAGGCAGAAGCCTCCCTGAGAGAACCAGCCATCTGTTCCTCTGCTCCAACACAATCTAGTTTCTCCATCTCAGCTGGCTTCATCTCCACCAGGCATGATGCCTCTACAGTCCCTTCAGCCTCCTTTACGATGCCCCCTGGAGGTGATGGGTCTTCCGTATTCTCCTGCCTGCTGTCCATCTGCTTTGACTCACTTCCATCCACCAGCTGCACTGTGGTCTGGGAGGGGTGTCCGTGGACATTGGCTGTGTGGAGAGCCAGGGGCACATCAGAGAAGTACTGGCCCAGGGGGATGCTAGATTGGGAGGCCTGGCCTTGAGGACTGGGCCTGGGGAGGACCTCAGCTCCTGACACCACACACCCTACACCCATAGTGGAGTCTGAAGAATGGCCGTAGGTACTTCCAGGTAGCGGAGACGGGAGAGCTAAAGTCCCGGACACCACACACCCCATGCCTAGAGTGGACTCAGGGGGACCGGTTGGGATGTGAGGGTGAGTCATGTCTGGCTGTACCACAGGACCCCAGCAAGGTCTAGCCAGGGCCGGGGCCGTCACTCCCTCAAGGGGACTGTAGGGGGCGCTAAAGTCATAGTCTACGGGTTTATGAGGCGCAAGAGCCTCCGGGAGGTCCGACCCAATTTCCTGTAGGGCCTGGTCCACTTGCAGGCTGTCGGCCGGCTTGGGCAGGAAGTCATTGGCGTCGATGTGCTCTGTGACGAGGGTGAGGTCGAGTTTCGTGGTGGGGAGTGCTGGGGGAGTGGATTGGTGGGGAAGGGGGGCCTGGGTTGGCTCCTCAGACT

Function

NR:

description
gamma-tubulin complex component 6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194009 True 1612 lncRNA 0.38 3 63733310 63735350

Neighbor

gene id symbol gene type direction distance location
LOC118941165 NA coding downstream 15143 63717837 ~ 63718167 (-)
LOC118944230 NA coding downstream 220440 63512730 ~ 63512870 (-)
LOC118944151 NA coding downstream 308454 63424804 ~ 63424856 (-)
shisal1b kiaa1644 coding downstream 382135 63282662 ~ 63351175 (-)
LOC110493507 LOC106560984 coding downstream 508473 63146769 ~ 63224837 (-)
appl2 LOC106560977 coding upstream 9700 63745050 ~ 63761413 (-)
nuak1b LOC106560975 coding upstream 137890 63873240 ~ 63904118 (-)
LOC110501772 LOC106560973 coding upstream 223257 63958607 ~ 63963969 (-)
LOC110501774 NA coding upstream 233379 63968729 ~ 63971324 (-)
tmem117 LOC106573612 coding upstream 366706 64102056 ~ 64170220 (-)
G170569 NA non-coding downstream 1612 63731314 ~ 63731698 (-)
G170551 NA non-coding downstream 28479 63704033 ~ 63704831 (-)
G170528 NA non-coding downstream 63007 63669603 ~ 63670303 (-)
G170526 NA non-coding downstream 64803 63667888 ~ 63668507 (-)
G170451 NA non-coding downstream 102135 63597829 ~ 63631175 (-)
G170573 NA non-coding upstream 6553 63741903 ~ 63744286 (-)
G170625 NA non-coding upstream 124282 63859632 ~ 63859863 (-)
G171118 NA non-coding upstream 268922 64004272 ~ 64011133 (-)
G171136 LOC106560972 non-coding upstream 349038 64084388 ~ 64085551 (-)
G171265 NA non-coding upstream 466562 64201912 ~ 64202219 (-)
G168141 NA other downstream 2217654 61515237 ~ 61515656 (-)
G168078 NA other downstream 2241639 61490434 ~ 61491671 (-)
LOC110493186 mlkl other downstream 2433218 61290149 ~ 61303507 (-)
G168021 NA other downstream 2477295 61254512 ~ 61256015 (-)
G172141 NA other upstream 1350222 65085572 ~ 65086188 (-)
G173121 NA other upstream 1648087 65383437 ~ 65383873 (-)
zcchc14 zcchc14 other upstream 1799121 65530911 ~ 65571025 (-)

Expression


Co-expression Network