G170573



Basic Information


Item Value
gene id G170573
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 63741903 ~ 63744286 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU194070
aaattgaaaatcattaaaCTAAATAAAGTGAATTTCTAATCAGCCTAATAAACAAGGCTGTGTGGGATTTATTAAATTAGACTGTGTGCAGCCAGTGGCAATGTCCACTGTGGGTTTAATGCCAGGAGCCGCTTATGAATATGACAGCTCTAACAGGCGACACCAAAAACAACCGCTATGTGGATGTCGGCTAAAGCGGTTCTGATTGAATTGAACCTTAAGGgcttgtaaactcagcaaaaaaaataaacatcctcactgtcaacagtgtttattttcagcaaacttaacatgtgtaaatatttgtatgaacataaagaTTCAACAGACTCTGTAATCCTCCTTAGTGTCTGCCCTTCATATTGCTCAGACTTCCTTGTGTTCCTTCTGCTTTAAGTAAAATGCACAGTCAGGGAAGTTATATACAAGCGATCtggaaaatgtttaaaaaaatgcaaGTGCAATGCTCTCTTTTGCAAATGACCTTTGGTTGTATATGACAGTGCTCCCTCCCACATAACTTTACATTCATTGTTTGACCTATAGTTTTCCAAAAAATGTTAACATGCTATCTTTAATAAATACAAGTGACATT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU194070 True 595 lncRNA 0.36 2 63741903 63744286

Neighbor


gene id symbol gene type direction distance location
LOC118941165 NA coding downstream 23736 63717837 ~ 63718167 (-)
LOC118944230 NA coding downstream 229033 63512730 ~ 63512870 (-)
LOC118944151 NA coding downstream 317047 63424804 ~ 63424856 (-)
shisal1b kiaa1644 coding downstream 390728 63282662 ~ 63351175 (-)
LOC110493507 LOC106560984 coding downstream 517066 63146769 ~ 63224837 (-)
appl2 LOC106560977 coding upstream 764 63745050 ~ 63761413 (-)
nuak1b LOC106560975 coding upstream 128954 63873240 ~ 63904118 (-)
LOC110501772 LOC106560973 coding upstream 214321 63958607 ~ 63963969 (-)
LOC110501774 NA coding upstream 224443 63968729 ~ 63971324 (-)
tmem117 LOC106573612 coding upstream 357770 64102056 ~ 64170220 (-)
G170520 NA non-coding downstream 6553 63733310 ~ 63735350 (-)
G170569 NA non-coding downstream 10205 63731314 ~ 63731698 (-)
G170551 NA non-coding downstream 37072 63704033 ~ 63704831 (-)
G170528 NA non-coding downstream 71600 63669603 ~ 63670303 (-)
G170526 NA non-coding downstream 73396 63667888 ~ 63668507 (-)
G170625 NA non-coding upstream 115346 63859632 ~ 63859863 (-)
G171118 NA non-coding upstream 259986 64004272 ~ 64011133 (-)
G171136 LOC106560972 non-coding upstream 340102 64084388 ~ 64085551 (-)
G171265 NA non-coding upstream 457626 64201912 ~ 64202219 (-)
G171279 NA non-coding upstream 477088 64221374 ~ 64222667 (-)
G168141 NA other downstream 2226247 61515237 ~ 61515656 (-)
G168078 NA other downstream 2250232 61490434 ~ 61491671 (-)
LOC110493186 mlkl other downstream 2441811 61290149 ~ 61303507 (-)
G168021 NA other downstream 2485888 61254512 ~ 61256015 (-)
G172141 NA other upstream 1341286 65085572 ~ 65086188 (-)
G173121 NA other upstream 1639151 65383437 ~ 65383873 (-)
zcchc14 zcchc14 other upstream 1790185 65530911 ~ 65571025 (-)

Expression



Co-expression Network