G171357


Basic Information

Item Value
gene id G171357
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 64388158 ~ 64389035 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU194927
TTCTTCTCGTCACGTACTGCTTCCATGTCGTAGGGCATTTTCTTCTCATCACGTACTGCTTCCCAAAAGCGATCGATAATGGATATTGTATTTCGTGACTTTCAGATGGCACAAGAGATGTACCTGACTATGATGACAGTGTTTACAAATCAGGGTTGAATGGCTGGTACACACTTATTAAAGGGTTCCAAAGGTTGAGGTCAATGAATTTCAGAAAACCCAGAAGACTTCGAACAACTAATCCACTACTTGGAGTATTGAAGATAGATGGATATTTTGAGGTTGAAGTAGTTTAGTTATGGGACAATTTTACCTCAAAGAATTGTCTTAAGATGATGAAGGCTTAAGTATTTTTGCATTAACTTTTTCACTGCTGACATTGTTGACATATGTTCTTTATATGATAAAATGGTAGTAATTTGTGCTGTGTAAATTTGTACATGTTCTCTTTAAAAATGTATTGCTGGAGAATTTCAACTGAAAATGACTGAATATTGTAATAAATTATTCAAACTGCGAAGATAATGATCCTCACGTGTCTGTTGATGTTGCTCTGAGTGCTCACAACAGACAGTCACGTAGTAGGCATCTTATCTGTATGTCTAGCACAGACGTGGGCTAAACTGACCATGAACTGCACTAaattgttaaaattgatgggaagatggatggagccaaatacaggaccattttggaagaaaacctaatggagtctgcaaaagacctgagactgggacgga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU194927 True 740 lncRNA 0.39 2 64388158 64389035

Neighbor

gene id symbol gene type direction distance location
LOC110493646 irak4 coding downstream 199305 64180281 ~ 64188853 (-)
tmem117 LOC106573612 coding downstream 217938 64102056 ~ 64170220 (-)
LOC110501774 NA coding downstream 416834 63968729 ~ 63971324 (-)
LOC110501772 LOC106560973 coding downstream 424189 63958607 ~ 63963969 (-)
nuak1b LOC106560975 coding downstream 484040 63873240 ~ 63904118 (-)
tesmin LOC106560967 coding upstream 1116 64390151 ~ 64400478 (-)
LOC110493697 LOC106561117 coding upstream 17025 64406060 ~ 64410316 (-)
ppp6r3 NA coding upstream 62267 64451302 ~ 64469833 (-)
lrp5 LOC106560964 coding upstream 86267 64475302 ~ 64526381 (-)
wu:fa25f02 LOC106560963 coding upstream 140039 64529074 ~ 64540391 (-)
G171378 NA non-coding downstream 6356 64379007 ~ 64381802 (-)
G171279 NA non-coding downstream 165491 64221374 ~ 64222667 (-)
G171265 NA non-coding downstream 185939 64201912 ~ 64202219 (-)
G171136 LOC106560972 non-coding downstream 302607 64084388 ~ 64085551 (-)
G171118 NA non-coding downstream 377025 64004272 ~ 64011133 (-)
G171416 NA non-coding upstream 81561 64470596 ~ 64471072 (-)
G171420 NA non-coding upstream 139440 64528475 ~ 64528793 (-)
G171458 NA non-coding upstream 166138 64555173 ~ 64555423 (-)
G171459 NA non-coding upstream 168588 64557623 ~ 64557888 (-)
LOC110493507 LOC106560984 other downstream 1237307 63146769 ~ 63224837 (-)
G168141 NA other downstream 2872502 61515237 ~ 61515656 (-)
G168078 NA other downstream 2896487 61490434 ~ 61491671 (-)
G172141 NA other upstream 696537 65085572 ~ 65086188 (-)
G173121 NA other upstream 994402 65383437 ~ 65383873 (-)
zcchc14 zcchc14 other upstream 1145436 65530911 ~ 65571025 (-)
G173370 LOC106560927 other upstream 1444306 65833341 ~ 65839074 (-)
G173431 NA other upstream 1532815 65921850 ~ 65922229 (-)

Expression


Co-expression Network