Gene
RNA
| Item | Value |
|---|---|
| gene id | G170961 |
| gene name | LOC106560967 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 64402476 ~ 64403416 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| protein lin-54 homolog isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU194493 | True | 479 | lncRNA | 0.51 | 2 | 64402476 | 64403416 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493669 | LOC106560968 | coding | upstream | 23113 | 64250758 ~ 64379363 (+) |
| LOC110493658 | LOC106560970 | coding | upstream | 222273 | 64169264 ~ 64180203 (+) |
| nell2a | LOC106560972 | coding | upstream | 310288 | 63989427 ~ 64092188 (+) |
| LOC110533812 | LOC106560951 | coding | upstream | 449734 | 63950941 ~ 63952742 (+) |
| mov10l1 | mov10l1 | coding | upstream | 459907 | 63915925 ~ 63942569 (+) |
| LOC110493690 | NA | coding | downstream | 703 | 64404119 ~ 64406404 (+) |
| LOC118936791 | LOC106560965 | coding | downstream | 24475 | 64427891 ~ 64428722 (+) |
| LOC110501781 | LOC106560965 | coding | downstream | 25418 | 64428834 ~ 64445900 (+) |
| anpepb | LOC106560949 | coding | downstream | 167439 | 64570855 ~ 64598616 (+) |
| akap13 | LOC106560961 | coding | downstream | 262719 | 64666135 ~ 64759393 (+) |
| G170953 | NA | non-coding | upstream | 7435 | 64391140 ~ 64395041 (+) |
| G170865 | NA | non-coding | upstream | 21301 | 64379995 ~ 64381175 (+) |
| G170751 | NA | non-coding | upstream | 258355 | 64066489 ~ 64144121 (+) |
| G170774 | NA | non-coding | upstream | 298365 | 64102087 ~ 64104111 (+) |
| G170697 | NA | non-coding | upstream | 405701 | 63996122 ~ 63996775 (+) |
| G170981 | NA | non-coding | downstream | 48012 | 64451428 ~ 64455336 (+) |
| G170992 | NA | non-coding | downstream | 71886 | 64475302 ~ 64475998 (+) |
| G171032 | NA | non-coding | downstream | 125684 | 64529100 ~ 64552688 (+) |
| G171472 | NA | non-coding | downstream | 163212 | 64566628 ~ 64567245 (+) |
| G171483 | NA | non-coding | downstream | 196946 | 64600362 ~ 64600578 (+) |
| G170150 | LOC106560975 | other | upstream | 524243 | 63873248 ~ 63878233 (+) |
| G170131 | NA | other | upstream | 572156 | 63820461 ~ 63830320 (+) |
| G169130 | NA | other | upstream | 1616833 | 62785358 ~ 62785643 (+) |
| LOC118936783 | LOC106560954 | other | upstream | 2522052 | 61870393 ~ 61880657 (+) |
| G167609 | LOC106560954 | other | upstream | 2675022 | 61726959 ~ 61727454 (+) |
| map1lc3b | map1lc3b | other | downstream | 1127730 | 65531126 ~ 65536787 (+) |
| jph3 | jph3 | other | downstream | 1190101 | 65593468 ~ 65648660 (+) |
| G172639 | NA | other | downstream | 1532180 | 65935596 ~ 65936133 (+) |
| LOC110494096 | LOC106561115 | other | downstream | 1859210 | 66262594 ~ 66266024 (+) |
| G173938 | LOC106573687 | other | downstream | 2338404 | 66741820 ~ 66742213 (+) |
