Gene
RNA
| Item | Value |
|---|---|
| gene id | G171458 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 64555173 ~ 64555423 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tripartite motif-containing protein 16-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU195039 | True | 251 | lncRNA | 0.46 | 1 | 64555173 | 64555423 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| wu:fa25f02 | LOC106560963 | coding | downstream | 14782 | 64529074 ~ 64540391 (-) |
| lrp5 | LOC106560964 | coding | downstream | 28792 | 64475302 ~ 64526381 (-) |
| ppp6r3 | NA | coding | downstream | 85340 | 64451302 ~ 64469833 (-) |
| LOC110493697 | LOC106561117 | coding | downstream | 144857 | 64406060 ~ 64410316 (-) |
| tesmin | LOC106560967 | coding | downstream | 154695 | 64390151 ~ 64400478 (-) |
| mespab | LOC106560948 | coding | upstream | 45491 | 64600914 ~ 64602076 (-) |
| mespbb | LOC106561116 | coding | upstream | 63126 | 64618549 ~ 64619983 (-) |
| sv2bb | LOC100380683 | coding | upstream | 66948 | 64622371 ~ 64662514 (-) |
| LOC118937287 | NA | coding | upstream | 222335 | 64777758 ~ 64779039 (-) |
| LOC110493816 | LOC106560960 | coding | upstream | 247454 | 64802877 ~ 64848068 (-) |
| G171420 | NA | non-coding | downstream | 26380 | 64528475 ~ 64528793 (-) |
| G171416 | NA | non-coding | downstream | 84101 | 64470596 ~ 64471072 (-) |
| G171357 | NA | non-coding | downstream | 166138 | 64388158 ~ 64389035 (-) |
| G171378 | NA | non-coding | downstream | 173371 | 64379007 ~ 64381802 (-) |
| G171459 | NA | non-coding | upstream | 2200 | 64557623 ~ 64557888 (-) |
| G171766 | NA | non-coding | upstream | 9456 | 64564879 ~ 64565124 (-) |
| G171768 | NA | non-coding | upstream | 11542 | 64566965 ~ 64567212 (-) |
| G171770 | NA | non-coding | upstream | 15489 | 64570912 ~ 64582818 (-) |
| G171771 | LOC106560949 | non-coding | upstream | 16335 | 64571758 ~ 64572344 (-) |
| tmem117 | LOC106573612 | other | downstream | 386775 | 64102056 ~ 64170220 (-) |
| LOC110501772 | LOC106560973 | other | downstream | 591352 | 63958607 ~ 63963969 (-) |
| LOC110493507 | LOC106560984 | other | downstream | 1404322 | 63146769 ~ 63224837 (-) |
| G168141 | NA | other | downstream | 3039517 | 61515237 ~ 61515656 (-) |
| G168078 | NA | other | downstream | 3063502 | 61490434 ~ 61491671 (-) |
| G172141 | NA | other | upstream | 530149 | 65085572 ~ 65086188 (-) |
| G173121 | NA | other | upstream | 828014 | 65383437 ~ 65383873 (-) |
| zcchc14 | zcchc14 | other | upstream | 979048 | 65530911 ~ 65571025 (-) |
| G173370 | LOC106560927 | other | upstream | 1277918 | 65833341 ~ 65839074 (-) |
| G173431 | NA | other | upstream | 1366427 | 65921850 ~ 65922229 (-) |
