Gene
RNA
| Item | Value |
|---|---|
| gene id | G171772 |
| gene name | LOC106560949 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 64572400 ~ 64573097 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| aminopeptidase N-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU195416 | True | 446 | lncRNA | 0.43 | 2 | 64572400 | 64573097 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| wu:fa25f02 | LOC106560963 | coding | downstream | 32009 | 64529074 ~ 64540391 (-) |
| lrp5 | LOC106560964 | coding | downstream | 46019 | 64475302 ~ 64526381 (-) |
| ppp6r3 | NA | coding | downstream | 102567 | 64451302 ~ 64469833 (-) |
| LOC110493697 | LOC106561117 | coding | downstream | 162084 | 64406060 ~ 64410316 (-) |
| tesmin | LOC106560967 | coding | downstream | 171922 | 64390151 ~ 64400478 (-) |
| mespab | LOC106560948 | coding | upstream | 27817 | 64600914 ~ 64602076 (-) |
| mespbb | LOC106561116 | coding | upstream | 45452 | 64618549 ~ 64619983 (-) |
| sv2bb | LOC100380683 | coding | upstream | 49274 | 64622371 ~ 64662514 (-) |
| LOC118937287 | NA | coding | upstream | 204661 | 64777758 ~ 64779039 (-) |
| LOC110493816 | LOC106560960 | coding | upstream | 229780 | 64802877 ~ 64848068 (-) |
| G171771 | LOC106560949 | non-coding | downstream | 56 | 64571758 ~ 64572344 (-) |
| G171768 | NA | non-coding | downstream | 5188 | 64566965 ~ 64567212 (-) |
| G171766 | NA | non-coding | downstream | 7276 | 64564879 ~ 64565124 (-) |
| G171459 | NA | non-coding | downstream | 14512 | 64557623 ~ 64557888 (-) |
| G171458 | NA | non-coding | downstream | 16977 | 64555173 ~ 64555423 (-) |
| G171775 | LOC106560949 | non-coding | upstream | 2317 | 64575414 ~ 64578865 (-) |
| G171827 | NA | non-coding | upstream | 84484 | 64657581 ~ 64721165 (-) |
| G171898 | NA | non-coding | upstream | 190196 | 64763293 ~ 64763622 (-) |
| G171907 | NA | non-coding | upstream | 202194 | 64775291 ~ 64775536 (-) |
| G172118 | NA | non-coding | upstream | 495497 | 65068594 ~ 65068887 (-) |
| tmem117 | LOC106573612 | other | downstream | 404002 | 64102056 ~ 64170220 (-) |
| LOC110501772 | LOC106560973 | other | downstream | 608579 | 63958607 ~ 63963969 (-) |
| LOC110493507 | LOC106560984 | other | downstream | 1421549 | 63146769 ~ 63224837 (-) |
| G168141 | NA | other | downstream | 3056744 | 61515237 ~ 61515656 (-) |
| G168078 | NA | other | downstream | 3080729 | 61490434 ~ 61491671 (-) |
| G172141 | NA | other | upstream | 512475 | 65085572 ~ 65086188 (-) |
| G173121 | NA | other | upstream | 810340 | 65383437 ~ 65383873 (-) |
| zcchc14 | zcchc14 | other | upstream | 961374 | 65530911 ~ 65571025 (-) |
| G173370 | LOC106560927 | other | upstream | 1260244 | 65833341 ~ 65839074 (-) |
| G173431 | NA | other | upstream | 1348753 | 65921850 ~ 65922229 (-) |
