Gene
RNA
| Item | Value |
|---|---|
| gene id | G171898 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 64763293 ~ 64763622 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU195551 | True | 330 | lncRNA | 0.44 | 1 | 64763293 | 64763622 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sv2bb | LOC100380683 | coding | downstream | 100779 | 64622371 ~ 64662514 (-) |
| mespbb | LOC106561116 | coding | downstream | 143310 | 64618549 ~ 64619983 (-) |
| mespab | LOC106560948 | coding | downstream | 161217 | 64600914 ~ 64602076 (-) |
| wu:fa25f02 | LOC106560963 | coding | downstream | 222902 | 64529074 ~ 64540391 (-) |
| lrp5 | LOC106560964 | coding | downstream | 236912 | 64475302 ~ 64526381 (-) |
| LOC118937287 | NA | coding | upstream | 14136 | 64777758 ~ 64779039 (-) |
| LOC110493816 | LOC106560960 | coding | upstream | 39255 | 64802877 ~ 64848068 (-) |
| ntrk3a | LOC106560958 | coding | upstream | 347652 | 65111274 ~ 65365999 (-) |
| det1 | LOC106560940 | coding | upstream | 723765 | 65487387 ~ 65509066 (-) |
| zcchc14 | zcchc14 | coding | upstream | 771657 | 65530911 ~ 65571025 (-) |
| G171827 | NA | non-coding | downstream | 42128 | 64657581 ~ 64721165 (-) |
| G171770 | NA | non-coding | downstream | 180475 | 64570912 ~ 64582818 (-) |
| G171775 | LOC106560949 | non-coding | downstream | 184428 | 64575414 ~ 64578865 (-) |
| G171772 | LOC106560949 | non-coding | downstream | 190196 | 64572400 ~ 64573097 (-) |
| G171771 | LOC106560949 | non-coding | downstream | 190949 | 64571758 ~ 64572344 (-) |
| G171907 | NA | non-coding | upstream | 11669 | 64775291 ~ 64775536 (-) |
| G172118 | NA | non-coding | upstream | 304972 | 65068594 ~ 65068887 (-) |
| G172119 | NA | non-coding | upstream | 305792 | 65069414 ~ 65069794 (-) |
| G172129 | NA | non-coding | upstream | 312667 | 65076289 ~ 65076554 (-) |
| G172929 | NA | non-coding | upstream | 329896 | 65093518 ~ 65093759 (-) |
| tmem117 | LOC106573612 | other | downstream | 594895 | 64102056 ~ 64170220 (-) |
| LOC110501772 | LOC106560973 | other | downstream | 799472 | 63958607 ~ 63963969 (-) |
| LOC110493507 | LOC106560984 | other | downstream | 1612442 | 63146769 ~ 63224837 (-) |
| G168141 | NA | other | downstream | 3247637 | 61515237 ~ 61515656 (-) |
| G168078 | NA | other | downstream | 3271622 | 61490434 ~ 61491671 (-) |
| G172141 | NA | other | upstream | 321950 | 65085572 ~ 65086188 (-) |
| G173121 | NA | other | upstream | 619815 | 65383437 ~ 65383873 (-) |
| G173370 | LOC106560927 | other | upstream | 1069719 | 65833341 ~ 65839074 (-) |
| G173431 | NA | other | upstream | 1158228 | 65921850 ~ 65922229 (-) |
