G172141


Basic Information

Item Value
gene id G172141
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 65085572 ~ 65086188 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU195797
ATGGGATTGTAAAAcccatattattattataggaATGGACAGAGCCCCAGTCTTAAACTCAGGTAACAGCGTTTATTTCAAGAGAGTACTGCCACATACACATttttccacaggttataaactgaaaatgacgtcagcgttttctaaatgttctatctcTTTCATGACACCGGTAGAGAGGCCCTATAGTTCTCGAGCCTTCGCTCCACGCCTGAAGTCAAGGTCAGTCAGTATAAAtcagcattctagacagtctggagatagtccGTCCCTGCCACCTGGAGATGGTACATTTATTTGTACAAGGAACAGACAGACCGTCATTGTTACTAAACTCCTGACTACATTATATACAATTGGgaatgggagcaagagagaaaattaatatatgtacagtacattatagcATTTGGACTAGTCAGTTCTGATTggaatgtatacataattagtcatttcaACCATAATTTCCTCCAACAGATAGGTCTTGACAACATCATCATATTTTAACTGAGTCCAAGGAGGTGCAAGTACTTGTAGTGTAGTGAAACACAACCATTAATTAATCAGGTATACTGTAAAAGGTATATGAATCATAGGGAGATACATTTACTGTATGT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU195797 True 617 TUCP 0.56 1 65085572 65086188

Neighbor

gene id symbol gene type direction distance location
LOC110493816 LOC106560960 coding downstream 237504 64802877 ~ 64848068 (-)
LOC118937287 NA coding downstream 306533 64777758 ~ 64779039 (-)
sv2bb LOC100380683 coding downstream 423058 64622371 ~ 64662514 (-)
mespbb LOC106561116 coding downstream 465589 64618549 ~ 64619983 (-)
mespab LOC106560948 coding downstream 483496 64600914 ~ 64602076 (-)
ntrk3a LOC106560958 coding upstream 25086 65111274 ~ 65365999 (-)
det1 LOC106560940 coding upstream 401199 65487387 ~ 65509066 (-)
zcchc14 zcchc14 coding upstream 449091 65530911 ~ 65571025 (-)
klhdc4 klhdc4 coding upstream 564891 65651079 ~ 65665571 (-)
slc7a5 slc7a5 coding upstream 599073 65685261 ~ 65715957 (-)
G172129 NA non-coding downstream 9018 65076289 ~ 65076554 (-)
G172119 NA non-coding downstream 15778 65069414 ~ 65069794 (-)
G172118 NA non-coding downstream 16685 65068594 ~ 65068887 (-)
G171907 NA non-coding downstream 310036 64775291 ~ 64775536 (-)
G171898 NA non-coding downstream 321950 64763293 ~ 64763622 (-)
G172929 NA non-coding upstream 7330 65093518 ~ 65093759 (-)
G172937 NA non-coding upstream 18352 65104540 ~ 65105721 (-)
G172938 NA non-coding upstream 24441 65110629 ~ 65111152 (-)
G173123 NA non-coding upstream 299286 65385474 ~ 65386709 (-)
G173134 NA non-coding upstream 320815 65407003 ~ 65407350 (-)
tmem117 LOC106573612 other downstream 917174 64102056 ~ 64170220 (-)
LOC110501772 LOC106560973 other downstream 1121751 63958607 ~ 63963969 (-)
LOC110493507 LOC106560984 other downstream 1934721 63146769 ~ 63224837 (-)
G168141 NA other downstream 3569916 61515237 ~ 61515656 (-)
G168078 NA other downstream 3593901 61490434 ~ 61491671 (-)
G173121 NA other upstream 297249 65383437 ~ 65383873 (-)
G173370 LOC106560927 other upstream 747153 65833341 ~ 65839074 (-)
G173431 NA other upstream 835662 65921850 ~ 65922229 (-)
LOC110494122 LOC106560915 other upstream 1191633 66277821 ~ 66299637 (-)

Expression


Co-expression Network