G173191


Basic Information

Item Value
gene id G173191
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 65477221 ~ 65478048 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU196960
tgaactttgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaccttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttcgggtatgtctctatcagttttgcacatcgagagactgacattttttcccatttctccttgcaatacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggatttaggtctggactttgacttgaccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaatttgaaccatcttctctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaatttgggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggata

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU196960 True 828 lncRNA 0.41 1 65477221 65478048

Neighbor

gene id symbol gene type direction distance location
ntrk3a LOC106560958 coding downstream 111222 65111274 ~ 65365999 (-)
LOC110493816 LOC106560960 coding downstream 629153 64802877 ~ 64848068 (-)
LOC118937287 NA coding downstream 698182 64777758 ~ 64779039 (-)
sv2bb LOC100380683 coding downstream 814707 64622371 ~ 64662514 (-)
mespbb LOC106561116 coding downstream 857238 64618549 ~ 64619983 (-)
det1 LOC106560940 coding upstream 9339 65487387 ~ 65509066 (-)
zcchc14 zcchc14 coding upstream 57231 65530911 ~ 65571025 (-)
klhdc4 klhdc4 coding upstream 173031 65651079 ~ 65665571 (-)
slc7a5 slc7a5 coding upstream 207213 65685261 ~ 65715957 (-)
LOC110493906 ca5a coding upstream 252683 65730731 ~ 65752045 (-)
G173134 NA non-coding downstream 69871 65407003 ~ 65407350 (-)
G173123 NA non-coding downstream 90512 65385474 ~ 65386709 (-)
G172938 NA non-coding downstream 366069 65110629 ~ 65111152 (-)
G172937 NA non-coding downstream 371500 65104540 ~ 65105721 (-)
G172929 NA non-coding downstream 383462 65093518 ~ 65093759 (-)
G173214 NA non-coding upstream 46374 65524422 ~ 65525128 (-)
G173239 NA non-coding upstream 96327 65574375 ~ 65575315 (-)
G173201 jph3 non-coding upstream 130491 65608539 ~ 65620372 (-)
G173121 NA other downstream 93348 65383437 ~ 65383873 (-)
G172141 NA other downstream 391033 65085572 ~ 65086188 (-)
tmem117 LOC106573612 other downstream 1308823 64102056 ~ 64170220 (-)
LOC110501772 LOC106560973 other downstream 1513400 63958607 ~ 63963969 (-)
LOC110493507 LOC106560984 other downstream 2326370 63146769 ~ 63224837 (-)
G173370 LOC106560927 other upstream 355293 65833341 ~ 65839074 (-)
G173431 NA other upstream 443802 65921850 ~ 65922229 (-)
LOC110494122 LOC106560915 other upstream 799773 66277821 ~ 66299637 (-)
G173675 NA other upstream 857364 66335412 ~ 66338386 (-)

Expression


Co-expression Network