Gene
RNA
| Item | Value |
|---|---|
| gene id | G172385 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 65481723 ~ 65482142 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU196047 | True | 420 | lncRNA | 0.39 | 1 | 65481723 | 65482142 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493825 | LOC106560959 | coding | upstream | 456858 | 64866284 ~ 65024865 (+) |
| akap13 | LOC106560961 | coding | upstream | 722330 | 64666135 ~ 64759393 (+) |
| anpepb | LOC106560949 | coding | upstream | 883107 | 64570855 ~ 64598616 (+) |
| LOC110501781 | LOC106560965 | coding | upstream | 1035823 | 64428834 ~ 64445900 (+) |
| LOC118936791 | LOC106560965 | coding | upstream | 1053001 | 64427891 ~ 64428722 (+) |
| map1lc3b | map1lc3b | coding | downstream | 48984 | 65531126 ~ 65536787 (+) |
| jph3 | jph3 | coding | downstream | 111326 | 65593468 ~ 65648660 (+) |
| lcat | LOC106560930 | coding | downstream | 310447 | 65792589 ~ 65801972 (+) |
| pla2g15 | lypa3 | coding | downstream | 330088 | 65812230 ~ 65821040 (+) |
| znf319b | LOC106560927 | coding | downstream | 347973 | 65830115 ~ 65839097 (+) |
| G172379 | NA | non-coding | upstream | 6205 | 65475310 ~ 65475518 (+) |
| G172350 | NA | non-coding | upstream | 43340 | 65436992 ~ 65438383 (+) |
| G172147 | NA | non-coding | upstream | 375941 | 65104584 ~ 65105782 (+) |
| G171609 | NA | non-coding | upstream | 579774 | 64842764 ~ 64901949 (+) |
| G171608 | NA | non-coding | upstream | 639419 | 64842023 ~ 64842304 (+) |
| G172386 | NA | non-coding | downstream | 50 | 65482192 ~ 65482461 (+) |
| G172387 | NA | non-coding | downstream | 479 | 65482621 ~ 65483071 (+) |
| G172388 | NA | non-coding | downstream | 933 | 65483075 ~ 65484436 (+) |
| G172389 | NA | non-coding | downstream | 5897 | 65488039 ~ 65488869 (+) |
| G172472 | NA | non-coding | downstream | 132080 | 65614222 ~ 65618491 (+) |
| G170150 | LOC106560975 | other | upstream | 1603490 | 63873248 ~ 63878233 (+) |
| G170131 | NA | other | upstream | 1651403 | 63820461 ~ 63830320 (+) |
| G169130 | NA | other | upstream | 2696080 | 62785358 ~ 62785643 (+) |
| LOC118936783 | LOC106560954 | other | upstream | 3601299 | 61870393 ~ 61880657 (+) |
| G167609 | LOC106560954 | other | upstream | 3754269 | 61726959 ~ 61727454 (+) |
| G172639 | NA | other | downstream | 453454 | 65935596 ~ 65936133 (+) |
| LOC110494096 | LOC106561115 | other | downstream | 780484 | 66262594 ~ 66266024 (+) |
| G173938 | LOC106573687 | other | downstream | 1259678 | 66741820 ~ 66742213 (+) |
