G173214



Basic Information


Item Value
gene id G173214
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 65524422 ~ 65525128 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU196987
AGGGAAATAATTAGTATACGTTTATGTACACTTTCATGAGTGAGAGAAGAGTGTAGAATTGTTCACACTGTCTGGACTTACCGTCTTAGACAGCGTTAGGATCTCACTGACTGGACTTACCGTCTTAGACAGCGTTAGGATCTCACTGACTGGACTTACCGTCTTAGACAGCGTTAGGATCTCACTGTCTGGACTTACCGTCTTAGACAGCGTTAGGATCTCACTGTCTGGACTTACCGTCTTAGACAGCGTTAGGATCTCACTGTCTGGACTTACCGTCTTAGACAGCGTTAGGATCTCACTGACTGGACTTACCGTCTTAGACAGCGTTAGGATCTCACTGACTAGATTGGAAAATGCAGTGACATCTTCAGGTTCAGAAGAACATTTGACACCATAGTACGATTTGACACCATAGTTCTTGCTAGCATTTATTGTTTACACATTTTATTTGGCTGCAACACAAACAAAACTGCTGTAATTCACAAACAATAAACAATGATTTAAAGGTTTGTTGCAGCCTGCAAACAACAATAAACTATGAGTGCACTCTACGTTCTGAACTGAAGGTCCGTAGGGCTCACTCCAAATGTGCTGTCTGATGAATAGGAAACTAAAAGCGTTGTGGG

Function


NR:

description
PREDICTED: uncharacterized protein LOC106594215 isoform X2

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU196987 True 629 lncRNA 0.42 2 65524422 65525128

Neighbor


gene id symbol gene type direction distance location
det1 LOC106560940 coding downstream 15356 65487387 ~ 65509066 (-)
ntrk3a LOC106560958 coding downstream 158423 65111274 ~ 65365999 (-)
LOC110493816 LOC106560960 coding downstream 676354 64802877 ~ 64848068 (-)
LOC118937287 NA coding downstream 745383 64777758 ~ 64779039 (-)
sv2bb LOC100380683 coding downstream 861908 64622371 ~ 64662514 (-)
zcchc14 zcchc14 coding upstream 10151 65530911 ~ 65571025 (-)
klhdc4 klhdc4 coding upstream 125951 65651079 ~ 65665571 (-)
slc7a5 slc7a5 coding upstream 160133 65685261 ~ 65715957 (-)
LOC110493906 ca5a coding upstream 205603 65730731 ~ 65752045 (-)
LOC110493917 LOC106560931 coding upstream 237593 65762721 ~ 65778516 (-)
G173191 NA non-coding downstream 46374 65477221 ~ 65478048 (-)
G173134 NA non-coding downstream 117072 65407003 ~ 65407350 (-)
G173123 NA non-coding downstream 137713 65385474 ~ 65386709 (-)
G172938 NA non-coding downstream 413270 65110629 ~ 65111152 (-)
G173239 NA non-coding upstream 49247 65574375 ~ 65575315 (-)
G173201 jph3 non-coding upstream 83411 65608539 ~ 65620372 (-)
G173293 NA non-coding upstream 129504 65654632 ~ 65658304 (-)
G173297 NA non-coding upstream 136724 65661852 ~ 65662637 (-)
G173121 NA other downstream 140549 65383437 ~ 65383873 (-)
G172141 NA other downstream 438234 65085572 ~ 65086188 (-)
tmem117 LOC106573612 other downstream 1356024 64102056 ~ 64170220 (-)
LOC110501772 LOC106560973 other downstream 1560601 63958607 ~ 63963969 (-)
LOC110493507 LOC106560984 other downstream 2373571 63146769 ~ 63224837 (-)
G173370 LOC106560927 other upstream 308213 65833341 ~ 65839074 (-)
G173431 NA other upstream 396722 65921850 ~ 65922229 (-)
LOC110494122 LOC106560915 other upstream 752693 66277821 ~ 66299637 (-)
G173675 NA other upstream 810284 66335412 ~ 66338386 (-)

Expression



Co-expression Network