Gene
RNA
| Item | Value |
|---|---|
| gene id | G172592 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 65869329 ~ 65870268 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein Z043_119643 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU196296 | True | 327 | lncRNA | 0.35 | 2 | 65869329 | 65870268 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493986 | csnk2a2 | coding | upstream | 3624 | 65852505 ~ 65865705 (+) |
| znf319b | LOC106560927 | coding | upstream | 30232 | 65830115 ~ 65839097 (+) |
| pla2g15 | lypa3 | coding | upstream | 48289 | 65812230 ~ 65821040 (+) |
| lcat | LOC106560930 | coding | upstream | 67357 | 65792589 ~ 65801972 (+) |
| jph3 | jph3 | coding | upstream | 220669 | 65593468 ~ 65648660 (+) |
| LOC110493994 | fa2h | coding | downstream | 14525 | 65884793 ~ 65917366 (+) |
| LOC110494001 | LOC106560924 | coding | downstream | 72891 | 65943159 ~ 65958750 (+) |
| LOC110494008 | LOC106560923 | coding | downstream | 105477 | 65975745 ~ 66031253 (+) |
| ldhd | ldhd | coding | downstream | 203023 | 66073291 ~ 66084029 (+) |
| gins3 | gins3 | coding | downstream | 249658 | 66119926 ~ 66135667 (+) |
| G172586 | NA | non-coding | upstream | 20163 | 65848953 ~ 65849166 (+) |
| G172583 | NA | non-coding | upstream | 22097 | 65846997 ~ 65847232 (+) |
| G172582 | NA | non-coding | upstream | 23792 | 65842248 ~ 65845537 (+) |
| G172581 | NA | non-coding | upstream | 28803 | 65840302 ~ 65840526 (+) |
| G172525 | NA | non-coding | upstream | 134901 | 65730812 ~ 65734428 (+) |
| G172630 | NA | non-coding | downstream | 48645 | 65918913 ~ 65919218 (+) |
| G172637 | NA | non-coding | downstream | 59096 | 65929364 ~ 65929679 (+) |
| G172658 | NA | non-coding | downstream | 95605 | 65965873 ~ 65970958 (+) |
| LOC110494202 | polr2c | non-coding | downstream | 489729 | 66359803 ~ 66363985 (+) |
| map1lc3b | map1lc3b | other | upstream | 332542 | 65531126 ~ 65536787 (+) |
| G170150 | LOC106560975 | other | upstream | 1991096 | 63873248 ~ 63878233 (+) |
| G170131 | NA | other | upstream | 2039009 | 63820461 ~ 63830320 (+) |
| G169130 | NA | other | upstream | 3083686 | 62785358 ~ 62785643 (+) |
| G172639 | NA | other | downstream | 65328 | 65935596 ~ 65936133 (+) |
| LOC110494096 | LOC106561115 | other | downstream | 392358 | 66262594 ~ 66266024 (+) |
| G173938 | LOC106573687 | other | downstream | 871552 | 66741820 ~ 66742213 (+) |
| LOC110494451 | zfpm1 | other | downstream | 1085256 | 66900017 ~ 66995521 (+) |
| LOC110494472 | utp4 | other | downstream | 1368622 | 67232278 ~ 67239902 (+) |
