Gene
RNA
| Item | Value |
|---|---|
| gene id | G173401 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 65882437 ~ 65883420 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 39S ribosomal protein L49, mitochondrial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU197199 | True | 296 | lncRNA | 0.40 | 2 | 65882437 | 65883420 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| usb1 | usb1 | coding | downstream | 52697 | 65821657 ~ 65829740 (-) |
| ccdc135 | drc7 | coding | downstream | 89640 | 65782330 ~ 65792797 (-) |
| LOC110493917 | LOC106560931 | coding | downstream | 103921 | 65762721 ~ 65778516 (-) |
| LOC110493906 | ca5a | coding | downstream | 130392 | 65730731 ~ 65752045 (-) |
| slc7a5 | slc7a5 | coding | downstream | 166480 | 65685261 ~ 65715957 (-) |
| snrkb | LOC106560921 | coding | upstream | 148603 | 66032023 ~ 66069982 (-) |
| znrf1 | znrf1 | coding | upstream | 200806 | 66084226 ~ 66118713 (-) |
| LOC110494064 | NA | coding | upstream | 261426 | 66144846 ~ 66146269 (-) |
| si:dkeyp-50b9.1 | LOC106560918 | coding | upstream | 327016 | 66210436 ~ 66223350 (-) |
| LOC110494122 | LOC106560915 | coding | upstream | 414768 | 66277821 ~ 66299637 (-) |
| G173393 | NA | non-coding | downstream | 4492 | 65875214 ~ 65877945 (-) |
| G173349 | NA | non-coding | downstream | 79087 | 65799892 ~ 65803350 (-) |
| G173328 | NA | non-coding | downstream | 158265 | 65723959 ~ 65724172 (-) |
| G173326 | NA | non-coding | downstream | 160116 | 65722121 ~ 65722321 (-) |
| G173309 | NA | non-coding | downstream | 188409 | 65693784 ~ 65694028 (-) |
| G173428 | NA | non-coding | upstream | 31643 | 65915063 ~ 65917401 (-) |
| G173429 | NA | non-coding | upstream | 36578 | 65919998 ~ 65920259 (-) |
| G173436 | NA | non-coding | upstream | 47137 | 65930557 ~ 65930764 (-) |
| G173448 | NA | non-coding | upstream | 67802 | 65951222 ~ 65972057 (-) |
| G173488 | NA | non-coding | upstream | 115955 | 65999375 ~ 66029700 (-) |
| G173370 | LOC106560927 | other | downstream | 43363 | 65833341 ~ 65839074 (-) |
| zcchc14 | zcchc14 | other | downstream | 345656 | 65530911 ~ 65571025 (-) |
| G173121 | NA | other | downstream | 498564 | 65383437 ~ 65383873 (-) |
| G172141 | NA | other | downstream | 796249 | 65085572 ~ 65086188 (-) |
| tmem117 | LOC106573612 | other | downstream | 1714039 | 64102056 ~ 64170220 (-) |
| G173431 | NA | other | upstream | 38430 | 65921850 ~ 65922229 (-) |
| G173675 | NA | other | upstream | 451992 | 66335412 ~ 66338386 (-) |
| G173696 | LOC106560906 | other | upstream | 491806 | 66375226 ~ 66390766 (-) |
| G174505 | NA | other | upstream | 808988 | 66692408 ~ 66692850 (-) |
