Gene
RNA
| Item | Value |
|---|---|
| gene id | G172630 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 65918913 ~ 65919218 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU196335 | True | 306 | lncRNA | 0.37 | 1 | 65918913 | 65919218 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110493994 | fa2h | coding | upstream | 1547 | 65884793 ~ 65917366 (+) |
| LOC110493986 | csnk2a2 | coding | upstream | 53208 | 65852505 ~ 65865705 (+) |
| znf319b | LOC106560927 | coding | upstream | 79816 | 65830115 ~ 65839097 (+) |
| pla2g15 | lypa3 | coding | upstream | 97873 | 65812230 ~ 65821040 (+) |
| lcat | LOC106560930 | coding | upstream | 116941 | 65792589 ~ 65801972 (+) |
| LOC110494001 | LOC106560924 | coding | downstream | 23941 | 65943159 ~ 65958750 (+) |
| LOC110494008 | LOC106560923 | coding | downstream | 56527 | 65975745 ~ 66031253 (+) |
| ldhd | ldhd | coding | downstream | 154073 | 66073291 ~ 66084029 (+) |
| gins3 | gins3 | coding | downstream | 200708 | 66119926 ~ 66135667 (+) |
| LOC110494051 | LOC106560919 | coding | downstream | 226372 | 66145590 ~ 66190766 (+) |
| G172592 | NA | non-coding | upstream | 48645 | 65869329 ~ 65870268 (+) |
| G172586 | NA | non-coding | upstream | 69747 | 65848953 ~ 65849166 (+) |
| G172583 | NA | non-coding | upstream | 71681 | 65846997 ~ 65847232 (+) |
| G172582 | NA | non-coding | upstream | 73376 | 65842248 ~ 65845537 (+) |
| G172581 | NA | non-coding | upstream | 78387 | 65840302 ~ 65840526 (+) |
| G172637 | NA | non-coding | downstream | 10146 | 65929364 ~ 65929679 (+) |
| G172658 | NA | non-coding | downstream | 46655 | 65965873 ~ 65970958 (+) |
| LOC110494202 | polr2c | non-coding | downstream | 440779 | 66359803 ~ 66363985 (+) |
| G173804 | NA | non-coding | downstream | 610897 | 66530115 ~ 66530338 (+) |
| jph3 | jph3 | other | upstream | 277937 | 65593468 ~ 65648660 (+) |
| map1lc3b | map1lc3b | other | upstream | 382126 | 65531126 ~ 65536787 (+) |
| G170150 | LOC106560975 | other | upstream | 2040680 | 63873248 ~ 63878233 (+) |
| G170131 | NA | other | upstream | 2088593 | 63820461 ~ 63830320 (+) |
| G169130 | NA | other | upstream | 3133270 | 62785358 ~ 62785643 (+) |
| G172639 | NA | other | downstream | 16378 | 65935596 ~ 65936133 (+) |
| LOC110494096 | LOC106561115 | other | downstream | 343408 | 66262594 ~ 66266024 (+) |
| G173938 | LOC106573687 | other | downstream | 822602 | 66741820 ~ 66742213 (+) |
| LOC110494451 | zfpm1 | other | downstream | 1036306 | 66900017 ~ 66995521 (+) |
| LOC110494472 | utp4 | other | downstream | 1319672 | 67232278 ~ 67239902 (+) |
