G173675


Basic Information

Item Value
gene id G173675
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 66335412 ~ 66338386 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU197514
TCTTTTGTATTCCACAAGAATAATGTTTTTACACCAATCCCTAAAAAAATGGATTATGACAGCATTGCCTCAACCGGGGCAGACATGTTTTCCCTAGAAATGTCACCTGACGTCATCCCCCAAGTCATACACTGGTGTCAAAATTTggcgctttcaagacaactggaaactcggacaAAAATGAGatcaaatcatgacatcagtgatcttcaggtcggagctcaaGAAAGATACCCAAGtctgacttggaattccgagtcgGGTGACTGTTCAAAAAGATTTTTCCCCAATCGGAGCCCGCTTTTCccggagttcccagttgtcttgaatgcggcattAACCCCTTGTAATCTGAGTGTGAACacatactgacattttcaacttgctAACTGGTTATAGTCAGTACTTGATTTTGGATGAAAGAAGTGCAGGAGCTGTCCTTTTCCAAGTGAGTCTATTAAAGACTATATTTACAGAAATTCTAAAATGACATTATGCTATAGAGACCTCTAGTTATTCACTGTTAAGGGGTTCATAAACATTTTCAATGACTTCCCCATGACTTTCAACCATTATTATACCCTACATGAAATAGTAAGTATTATTGACACTGGAAGGCTGCagtgtctgatcccatgtaggcctaccatctcctgccattgtgcccttgatcaaggcacttaGCCCTGAAACACCCAAGTCTGCTTATCAAGGTCCTGTTGAgcagctgatgtttaggctacaatGTGGTTAGATCAGGGCTTGAACAACTGCATGCACACCCAGTAGctatcctggaggatggttgccACACTTGATATAAAATAGTGCAACaatacaaccaaatacttttgtCTTTATAAAATTATTCCCTAACTCAATGAAACAGGTGGATAAGGTGGGCTACTTCAGAGCAAGGTCTCCCACTAGACATGTTTATTCATATAAGCCTCAAATATTCATGTTTCAGGGGAGATCTATGCACAGCAAGTTATTTGTCAATTATGCTATTCTTAGAATATGTTTTAACGTTGTCGCAATTACATGGCTACTGTTTAATATCGGGGAATCCCATCTTTTCAACGTTGCAGATGTACAGTATTTAGGccatctacagtacagtgccGGTGGAAAGGCAACAATGATATTAATGCTTAGCTGTAGTTAACGATCGAGATAACTGCTCCAAGGAAAtgccaaaataaataaaaaacaccaacatagtgtcttaattTCAGTTGTATGCATTCAGTTGTATAACTgtctaggtacccccctttcctttctctttaatagggtgttgggctaccagaacagcttcaatgcatcttggcatagattctacaagtgtctggaactctattggagggatgcgacgcCATTCTTCCATGAAAAATTCCACAATTGGGTGTTTTGTCGAAGGTGGTGGGAAACGCTGTCTCCTATGTACCTTTGGGACCCCTTTTTCAAAGTCAATTCATtgagatctcttctagccatggtaggcAACAATGCACAACTTGGCATTTTTATAAATTACCTTAAGCATGATGGGAGGTTCATTTCTTAATTAACTCAGAAACAACAACTGTATGGAAGAACCTGCTTTCAATAGACTTTGTATCCCCcatttaattaattatttattttgttaCCTGTATTTCTTTCTGGCAGTGATCAAACACTTAAAGTTATCAGATTCATCAACATATTATTCCAATAAAGAAGTCATGAATTTCACACATTTTAAATTGTATTACTGTTCATTTCAAGTTTATATAACCGCAAGCTTGTGTGTGTGATTAGTGAATTTAAAAGGTGCAAATTGGTAGTCAGGCACAGATGGCAGTAGGCAGACAGAATGGCATGCTAGGAATAGGCACCAGGGTGTCAGAGAAGatggatgccaagagtgtgcaaaactgtcatcaaggcaaagggttgctatttgaagaatctcaaattttctggttactacatgattccatgtgttatttcatagtttgtcttcactattattctacaatgtataaaatagtaaaaataaagaaaaatccttgaattagttggtgtccaaacttttgactgctagtGTACAGTGTGTTTGTATTTATGTGAAAATTGAAACTGTACATAAAATGGTGCAGTGAATTAAAACGAAGGAGGGTGTGGTTTGAGGTGTATGTTGGGTATGGTGTGGACCGGCTGTGAGTTGGGTGTGTAGTCTGTGGGatagagaagagagcagagctgGGCAGAGTTTCCCACTAGATTGTGTATAACTGGCTGTGGCTAAACTCAAGTGTATCCTCACAACCAGGCCCTGGAAGAGATCCCTCAGATACTGGGCATCCAGTGCCATTCTCTGGGCCAGCTCGCGTCGCTCCTCTGCATTACAACACACCAGCCTCTTCTGCATCAACACCCTCACATACTCCACCACCATCAGCCACTGCATGCAAACGCTACTCAGGACACTGGTATAAGTCAGCTACAGACTAATATGATTGTCAAAAGGTGCTGGCAGGGTGGGCGAACACAACTACACATCTCAATATGGCGCTCCAGGACGCCACATAACTTCGAAGTGAGCGTGATGTATCCCTGGGCCAGTCAGGAGCGAGACAGGAGTCCCTGCAGGAAGGGCTGGAGCTCCAGCAGTAGTTGACCTATCGCCAGACGGCAGGCCATCCTCACAACCCGGAACAGAGCAGCCAGGGGTTGATAGAGGATGAGGATGATGCAGTCTCTTAGAGGCCAGTAGATAGAGGTGGAACTTGTTATTTGTGCTTTGATCCCAGCGATGCTCCTTCCCAAATTCAACAGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197514 True 2828 TUCP 0.48 4 66335412 66338386

Neighbor

gene id symbol gene type direction distance location
LOC110494122 LOC106560915 coding downstream 35775 66277821 ~ 66299637 (-)
si:dkeyp-50b9.1 LOC106560918 coding downstream 112062 66210436 ~ 66223350 (-)
LOC110494064 NA coding downstream 189143 66144846 ~ 66146269 (-)
znrf1 znrf1 coding downstream 216699 66084226 ~ 66118713 (-)
snrkb LOC106560921 coding downstream 265430 66032023 ~ 66069982 (-)
LOC110494195 LOC106560909 coding upstream 5244 66343630 ~ 66354538 (-)
LOC110494316 NA coding upstream 243734 66582120 ~ 66586583 (-)
LOC110494333 LOC106560895 coding upstream 291173 66629559 ~ 66633818 (-)
LOC110533844 NA coding upstream 298767 66637153 ~ 66638202 (-)
LOC110494342 LOC106560894 coding upstream 302676 66641062 ~ 66643589 (-)
G173676 NA non-coding downstream 468 66333913 ~ 66334944 (-)
G173651 NA non-coding downstream 34691 66300503 ~ 66300721 (-)
G173636 NA non-coding downstream 76511 66258687 ~ 66258901 (-)
G173619 NA non-coding downstream 78450 66254806 ~ 66256962 (-)
G173679 NA non-coding upstream 3711 66342097 ~ 66342307 (-)
G173680 NA non-coding upstream 20538 66358924 ~ 66359445 (-)
G173690 NA non-coding upstream 34753 66373139 ~ 66373747 (-)
G173695 NA non-coding upstream 76890 66415276 ~ 66416390 (-)
G173693 NA non-coding upstream 83255 66421641 ~ 66422324 (-)
G173431 NA other downstream 413183 65921850 ~ 65922229 (-)
G173370 LOC106560927 other downstream 496338 65833341 ~ 65839074 (-)
zcchc14 zcchc14 other downstream 798631 65530911 ~ 65571025 (-)
G173121 NA other downstream 951539 65383437 ~ 65383873 (-)
G173696 LOC106560906 other upstream 36840 66375226 ~ 66390766 (-)
G174505 NA other upstream 354022 66692408 ~ 66692850 (-)
G177487 NA other upstream 3252749 69591135 ~ 69591722 (-)
LOC110494902 LOC106560839 other upstream 3355223 69648833 ~ 69767366 (-)
LOC110501848 NA other upstream 4222136 70552263 ~ 70642587 (-)

Expression


Co-expression Network