G173679



Basic Information


Item Value
gene id G173679
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 66342097 ~ 66342307 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU197518
ACATTAATATGGAGAACCGCGGGACGAAGGAGTGACATTACTGGGCAAGAGCTGGCCATTTCAAATGAATTAATTCttcccttgccctgcaagtgtaaaCGCATCAgatgtcatcagaagtgtccacttaatttgagggctgaggggagagggtgtgtcttttacatgtttggaatgcagccacagtgactgagttcatcaggaagtgttt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU197518 True 211 lncRNA 0.45 1 66342097 66342307

Neighbor


gene id symbol gene type direction distance location
LOC110494122 LOC106560915 coding downstream 42460 66277821 ~ 66299637 (-)
si:dkeyp-50b9.1 LOC106560918 coding downstream 118747 66210436 ~ 66223350 (-)
LOC110494064 NA coding downstream 195828 66144846 ~ 66146269 (-)
znrf1 znrf1 coding downstream 223384 66084226 ~ 66118713 (-)
snrkb LOC106560921 coding downstream 272115 66032023 ~ 66069982 (-)
LOC110494195 LOC106560909 coding upstream 1323 66343630 ~ 66354538 (-)
LOC110494316 NA coding upstream 239813 66582120 ~ 66586583 (-)
LOC110494333 LOC106560895 coding upstream 287252 66629559 ~ 66633818 (-)
LOC110533844 NA coding upstream 294846 66637153 ~ 66638202 (-)
LOC110494342 LOC106560894 coding upstream 298755 66641062 ~ 66643589 (-)
G173676 NA non-coding downstream 7153 66333913 ~ 66334944 (-)
G173651 NA non-coding downstream 41376 66300503 ~ 66300721 (-)
G173636 NA non-coding downstream 83196 66258687 ~ 66258901 (-)
G173619 NA non-coding downstream 85135 66254806 ~ 66256962 (-)
G173680 NA non-coding upstream 16617 66358924 ~ 66359445 (-)
G173690 NA non-coding upstream 30832 66373139 ~ 66373747 (-)
G173695 NA non-coding upstream 72969 66415276 ~ 66416390 (-)
G173693 NA non-coding upstream 79334 66421641 ~ 66422324 (-)
G173725 NA non-coding upstream 84601 66426908 ~ 66427190 (-)
G173675 NA other downstream 3711 66335412 ~ 66338386 (-)
G173431 NA other downstream 419868 65921850 ~ 65922229 (-)
G173370 LOC106560927 other downstream 503023 65833341 ~ 65839074 (-)
zcchc14 zcchc14 other downstream 805316 65530911 ~ 65571025 (-)
G173696 LOC106560906 other upstream 32919 66375226 ~ 66390766 (-)
G174505 NA other upstream 350101 66692408 ~ 66692850 (-)
G177487 NA other upstream 3248828 69591135 ~ 69591722 (-)
LOC110494902 LOC106560839 other upstream 3351302 69648833 ~ 69767366 (-)
LOC110501848 NA other upstream 4218215 70552263 ~ 70642587 (-)

Expression


G173679 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

G173679 Expression in each Bioproject

Bar chart with 11 bars.
G173679 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 14.
End of interactive chart.

Co-expression Network