G173696 (LOC106560906)


Basic Information

Item Value
gene id G173696
gene name LOC106560906
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 66375226 ~ 66390766 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU197536
TGATTCTGGAACAGGCTCTGTAGCAGTGGATGGGTTGCTGCTGGCAGGGGGTGCCTCTGTAGGAGGGGGGAGGACTGTGCTGTCTGGCCCAGGAGaggggctgctgctgctgggggcTGGGGACCGGACCGacggggaggagggtgggggtgtatgagGAGCCAGACCACTCCGGCCATTCTCCAGCCCGTTGGCAGTCAGCTCAACTTTACCTGCACTCCCAGGGCTGCTGTGGGAGTTCTTGACCGAGCGGAGGTGACCAGAAGCCCCAGGACTCTGGTCCTCACTCAGCTCTCCGTTAGTCAGAGAGCCCCCCGGGGAACCCCCTCGCGAACCCCCTGCAGAGTGTCTGTGAGTCCTGCCGTGGGGGCCGCTGGCTGTACTGGGGGTTTCCTCACTCTGGGTCCTGCGTAGGTTTTGTCTGTCCGACTGCAGCATCTTGTCTGTTGCTGTGCTGCCATTGGGCAAAGATCCCAGATCAACAACCAGGCCGTCCAGACAGACGTTCAGCTCGCCTCCTGCTACAACTGAGCCTTTGTTCTCTGTCTGCAAGACCAGACTGAGCTGCAGATTCTCCATCTTGCCATCATGTGTACGCAGGGTGTCAAGCAGGTCAATGGTGGCACTTCCCAGCAACTCCTTCCTCAAGGTGTGGCAGCTCCACAACTTCAGATCTAAGTGGCTCTGAGGCGTCACATTCAGGGTGAGGTCCTCGTTCCACTGTAACTCAAGGTGTCCAGTGCGTTTTCCTGTTTTCTTGGTTTCACTAGACAGGCCATCGGCAGTCACCTCCACAAAAGAGCTGAGTCTGGAACGGGTGGGCAGCTTAGGTGACTGAGGCTTTGCTGAGACCACTTTCAAGGTCAACTGTGATTTTTCTGTGGTCTGGACATTGCCAGGTCTTGTCACGCTGGCAGCTGCCATGACATCACagccCTTTTTTAGCTGTGGTCCGCTGGTTCAACTAGCTAGTTAACTTTCATTTCCGCCTGCC

Function

NR:

description
NEDD4-like E3 ubiquitin-protein ligase WWP2 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197536 True 994 TUCP 0.58 8 66375226 66390766

Neighbor

gene id symbol gene type direction distance location
LOC110494195 LOC106560909 coding downstream 20688 66343630 ~ 66354538 (-)
LOC110494122 LOC106560915 coding downstream 75589 66277821 ~ 66299637 (-)
si:dkeyp-50b9.1 LOC106560918 coding downstream 151876 66210436 ~ 66223350 (-)
LOC110494064 NA coding downstream 228957 66144846 ~ 66146269 (-)
znrf1 znrf1 coding downstream 256513 66084226 ~ 66118713 (-)
LOC110494316 NA coding upstream 191354 66582120 ~ 66586583 (-)
LOC110494333 LOC106560895 coding upstream 238793 66629559 ~ 66633818 (-)
LOC110533844 NA coding upstream 246387 66637153 ~ 66638202 (-)
LOC110494342 LOC106560894 coding upstream 250296 66641062 ~ 66643589 (-)
LOC110494363 klhl36 coding upstream 277108 66667874 ~ 66678769 (-)
G173690 NA non-coding downstream 1479 66373139 ~ 66373747 (-)
G173680 NA non-coding downstream 15781 66358924 ~ 66359445 (-)
G173679 NA non-coding downstream 32919 66342097 ~ 66342307 (-)
G173676 NA non-coding downstream 40282 66333913 ~ 66334944 (-)
G173651 NA non-coding downstream 74505 66300503 ~ 66300721 (-)
G173695 NA non-coding upstream 24510 66415276 ~ 66416390 (-)
G173693 NA non-coding upstream 30875 66421641 ~ 66422324 (-)
G173725 NA non-coding upstream 36142 66426908 ~ 66427190 (-)
G173810 NA non-coding upstream 105352 66496118 ~ 66496490 (-)
G173832 NA non-coding upstream 139043 66529809 ~ 66530010 (-)
G173675 NA other downstream 36840 66335412 ~ 66338386 (-)
G173431 NA other downstream 452997 65921850 ~ 65922229 (-)
G173370 LOC106560927 other downstream 536152 65833341 ~ 65839074 (-)
zcchc14 zcchc14 other downstream 838445 65530911 ~ 65571025 (-)
G174505 NA other upstream 301642 66692408 ~ 66692850 (-)
G177487 NA other upstream 3200369 69591135 ~ 69591722 (-)
LOC110494902 LOC106560839 other upstream 3302843 69648833 ~ 69767366 (-)
LOC110501848 NA other upstream 4169756 70552263 ~ 70642587 (-)
fam169b fam169b other upstream 4378392 70769140 ~ 70773282 (-)

Expression


Co-expression Network