Gene
RNA
| Item | Value |
|---|---|
| gene id | G173806 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 66531666 ~ 66531887 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: uncharacterized protein LOC111196400 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU197658 | True | 222 | lncRNA | 0.41 | 1 | 66531666 | 66531887 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494260 | LOC106560901 | coding | upstream | 2105 | 66508242 ~ 66529561 (+) |
| LOC110494252 | LOC106560900 | coding | upstream | 23676 | 66496959 ~ 66507990 (+) |
| LOC110494247 | LOC106560903 | coding | upstream | 36584 | 66473806 ~ 66495082 (+) |
| adat1 | adat1 | coding | upstream | 70789 | 66434480 ~ 66460877 (+) |
| LOC110494212 | LOC106560906 | coding | upstream | 109329 | 66375132 ~ 66422337 (+) |
| LOC110494278 | chmp1a | coding | downstream | 6068 | 66537955 ~ 66547328 (+) |
| LOC110494286 | LOC106560898 | coding | downstream | 17658 | 66549545 ~ 66552357 (+) |
| LOC110494295 | fanca | coding | downstream | 23660 | 66555547 ~ 66581651 (+) |
| vps9d1 | LOC106560896 | coding | downstream | 54512 | 66586399 ~ 66611590 (+) |
| LOC110494358 | LOC106560893 | coding | downstream | 124957 | 66656844 ~ 66665610 (+) |
| G173805 | NA | non-coding | upstream | 956 | 66530452 ~ 66530710 (+) |
| G173804 | NA | non-coding | upstream | 1328 | 66530115 ~ 66530338 (+) |
| LOC110494202 | polr2c | non-coding | upstream | 168196 | 66359803 ~ 66363985 (+) |
| LOC110494008 | LOC106560923 | non-coding | upstream | 532102 | 65975745 ~ 66031253 (+) |
| G172658 | NA | non-coding | upstream | 560708 | 65965873 ~ 65970958 (+) |
| G173808 | NA | non-coding | downstream | 1571 | 66533458 ~ 66533659 (+) |
| G173835 | NA | non-coding | downstream | 3327 | 66535214 ~ 66535447 (+) |
| G173843 | NA | non-coding | downstream | 80757 | 66612644 ~ 66614161 (+) |
| G173844 | NA | non-coding | downstream | 82486 | 66614373 ~ 66615201 (+) |
| G173840 | NA | non-coding | downstream | 83478 | 66615365 ~ 66617682 (+) |
| LOC110494096 | LOC106561115 | other | upstream | 265643 | 66262594 ~ 66266024 (+) |
| G172639 | NA | other | upstream | 595533 | 65935596 ~ 65936133 (+) |
| jph3 | jph3 | other | upstream | 890690 | 65593468 ~ 65648660 (+) |
| map1lc3b | map1lc3b | other | upstream | 994879 | 65531126 ~ 65536787 (+) |
| G170150 | LOC106560975 | other | upstream | 2653433 | 63873248 ~ 63878233 (+) |
| G173938 | LOC106573687 | other | downstream | 209933 | 66741820 ~ 66742213 (+) |
| LOC110494451 | zfpm1 | other | downstream | 423637 | 66900017 ~ 66995521 (+) |
| LOC110494472 | utp4 | other | downstream | 707003 | 67232278 ~ 67239902 (+) |
| hsbp1b | LOC106561110 | other | downstream | 954276 | 67486128 ~ 67488205 (+) |
| G176612 | LOC100846954 | other | downstream | 2328951 | 68860838 ~ 68861368 (+) |
