G174434


Basic Information

Item Value
gene id G174434
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 66546120 ~ 66547318 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU198346
AGAGGGCTTTTATTTTATTTCCACAAGATAATATACATTGGAGTATAAATAAACCTCTCCCTGTAAAAATGAAAATGATTCCCAAAATGTCTTACTGTAGCTACAGCAGCCACATTTCTGGTTTGATGGGTACAGAAAGGGGGAATCCTTATTATATGCTGACATATAACCTACATAGGATCAATCACTAGAACTAGTTTAATTCAGGCACTGAGGAGAAGCACCTACGCAAATACCTGCATCCCAATAAGGCGTACATATTCAAAGCAAATAGGTATGATTTAGCAAAAGATTagactgcttaaaaaaaaaaaacgactgAGAATTGTCCTCCCTGTACAGTATATAACTAATGCTTACATTATGTAAATTGTTACATTATGTCAAAGGATAATTTCTCATAGGAGTTAAGAagaagtagtgtgtgtggtgtcttgACTTTCTTTGTGTTGTCAAACTGTGGAAAAGTTGGTATACATCAGAGCACTCATATTGATGGTCTGTTTGGTAGAAGAAGGCTTCCCCTTTACACTGTGTTGAAGATAACCTGTGTTTTACTCCTTCCATCTGACCGGTAGAGAATAGAAaacaaaatatattaaatataaaaacaaaGACAACCCCACATTTGAAATACAACACCCAATAAGTGCCAGGGGTCCAAGCTTATAATACATGAATATGTCTGTTTTAAAACACCCCGTTCCACTATAGGATTTATATATTTTGTAAAACCCTCCCATTCAAATatacatacaaaaaaaaaattctcaAGTGGCAATGTACCAAAATTCACAAGAACTAACCAACCAAGGGGAATATTTAAGGGAGCCCTGAAGGAGAGAAGacaagagtgagagacagaaagactgatATGGGAGAGGGAAAACCAGAGGTGGGGAAAATAGATTGTTGTgcaacagagaaagagatggacagagagacaaaggagagacCCATGCCTTCTCAGGTGGTATATTCAGCAAcacagtgtgagtgtgtatataaatAGAAGTGGGAATGGAAATCAATAGGCTCATTAGGTCATCACGATAAGAACAGTTCGATAGAGTCACACAGCTCCCCGCTGTCTGTTCCCAAGCAGCTGTCAAGCCTCCATCTGTCTCGCAAATACCCAAGATATATCTTCAGTTCCGCAACGCTGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198346 True 1167 lncRNA 0.38 2 66546120 66547318

Neighbor

gene id symbol gene type direction distance location
LOC110494195 LOC106560909 coding downstream 191582 66343630 ~ 66354538 (-)
LOC110494122 LOC106560915 coding downstream 246483 66277821 ~ 66299637 (-)
si:dkeyp-50b9.1 LOC106560918 coding downstream 322770 66210436 ~ 66223350 (-)
LOC110494064 NA coding downstream 399851 66144846 ~ 66146269 (-)
znrf1 znrf1 coding downstream 427407 66084226 ~ 66118713 (-)
LOC110494316 NA coding upstream 34802 66582120 ~ 66586583 (-)
LOC110494333 LOC106560895 coding upstream 82241 66629559 ~ 66633818 (-)
LOC110533844 NA coding upstream 89835 66637153 ~ 66638202 (-)
LOC110494342 LOC106560894 coding upstream 93744 66641062 ~ 66643589 (-)
LOC110494363 klhl36 coding upstream 120556 66667874 ~ 66678769 (-)
G174428 chmp1a non-coding downstream 679 66537902 ~ 66545441 (-)
G173832 NA non-coding downstream 16110 66529809 ~ 66530010 (-)
G173810 NA non-coding downstream 49630 66496118 ~ 66496490 (-)
G173725 NA non-coding downstream 118930 66426908 ~ 66427190 (-)
G173693 NA non-coding downstream 123796 66421641 ~ 66422324 (-)
G174435 NA non-coding upstream 4576 66551894 ~ 66552356 (-)
G174436 NA non-coding upstream 5740 66553058 ~ 66553386 (-)
G174437 NA non-coding upstream 6237 66553555 ~ 66553912 (-)
G174447 NA non-coding upstream 74257 66621575 ~ 66622004 (-)
G174475 NA non-coding upstream 105213 66652531 ~ 66654391 (-)
G173696 LOC106560906 other downstream 155354 66375226 ~ 66390766 (-)
G173675 NA other downstream 207734 66335412 ~ 66338386 (-)
G173431 NA other downstream 623891 65921850 ~ 65922229 (-)
G173370 LOC106560927 other downstream 707046 65833341 ~ 65839074 (-)
G174505 NA other upstream 145090 66692408 ~ 66692850 (-)
G177487 NA other upstream 3043817 69591135 ~ 69591722 (-)
LOC110494902 LOC106560839 other upstream 3146291 69648833 ~ 69767366 (-)
LOC110501848 NA other upstream 4013204 70552263 ~ 70642587 (-)
fam169b fam169b other upstream 4221840 70769140 ~ 70773282 (-)

Expression


Co-expression Network