G174435



Basic Information


Item Value
gene id G174435
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 66551894 ~ 66552356 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU198349
atttttttctttttaattcacacaaacacacattgcaAAGAGACATGCAAATGTACTCACATTGGCACACACAAAGAAACCAATGTTAATCAGTCCACAAATATGACAAGCAAATATTCTCAGACACAAAAGTACTGGCTATATTGCTCAGCTGTGCTGCAGCACAATCTTTACTTTAGTACAGCTCAGTATGAAGATTCCTTTTTAAAATAAAGATCCTCCTTGGACAAACTTAGTCTCGAATACCAGATCCTATGCAACAGTGACAAGCCGGAGCGTTTTAAAATTGTGGGAGGCAACACGGATGTCTTCAGAGACTTGGACAAACTCAAGGCTCCTTTTATGAATGCTTTTATTTTTTGTCTTCTCTTTATAATTCAAGTACATGGATTCTTAGATAACCACCTATGATTCCCGAAAAAAAACAATCAGTAGCAGTACTTCAAAACACCACACATTTTCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU198349 True 463 lncRNA 0.37 1 66551894 66552356

Neighbor


gene id symbol gene type direction distance location
LOC110494195 LOC106560909 coding downstream 197356 66343630 ~ 66354538 (-)
LOC110494122 LOC106560915 coding downstream 252257 66277821 ~ 66299637 (-)
si:dkeyp-50b9.1 LOC106560918 coding downstream 328544 66210436 ~ 66223350 (-)
LOC110494064 NA coding downstream 405625 66144846 ~ 66146269 (-)
znrf1 znrf1 coding downstream 433181 66084226 ~ 66118713 (-)
LOC110494316 NA coding upstream 29764 66582120 ~ 66586583 (-)
LOC110494333 LOC106560895 coding upstream 77203 66629559 ~ 66633818 (-)
LOC110533844 NA coding upstream 84797 66637153 ~ 66638202 (-)
LOC110494342 LOC106560894 coding upstream 88706 66641062 ~ 66643589 (-)
LOC110494363 klhl36 coding upstream 115518 66667874 ~ 66678769 (-)
G174434 NA non-coding downstream 4576 66546120 ~ 66547318 (-)
G174428 chmp1a non-coding downstream 6453 66537902 ~ 66545441 (-)
G173832 NA non-coding downstream 21884 66529809 ~ 66530010 (-)
G173810 NA non-coding downstream 55404 66496118 ~ 66496490 (-)
G173725 NA non-coding downstream 124704 66426908 ~ 66427190 (-)
G174436 NA non-coding upstream 702 66553058 ~ 66553386 (-)
G174437 NA non-coding upstream 1199 66553555 ~ 66553912 (-)
G174447 NA non-coding upstream 69219 66621575 ~ 66622004 (-)
G174475 NA non-coding upstream 100175 66652531 ~ 66654391 (-)
G174508 NA non-coding upstream 142937 66695293 ~ 66695679 (-)
G173696 LOC106560906 other downstream 161128 66375226 ~ 66390766 (-)
G173675 NA other downstream 213508 66335412 ~ 66338386 (-)
G173431 NA other downstream 629665 65921850 ~ 65922229 (-)
G173370 LOC106560927 other downstream 712820 65833341 ~ 65839074 (-)
G174505 NA other upstream 140052 66692408 ~ 66692850 (-)
G177487 NA other upstream 3038779 69591135 ~ 69591722 (-)
LOC110494902 LOC106560839 other upstream 3141253 69648833 ~ 69767366 (-)
LOC110501848 NA other upstream 4008166 70552263 ~ 70642587 (-)
fam169b fam169b other upstream 4216802 70769140 ~ 70773282 (-)

Expression



Co-expression Network