G174447



Basic Information


Item Value
gene id G174447
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 66621575 ~ 66622004 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU198372
cgcagtggttaagggcgctgtactgcagcgccagctgtgccatcagagtctgggttcgcgcccaggctctgtcgtaaccggccgcgaccgggaggtccgtggggcgacgcacaattggcctagcgttgcccgggttagggagggcttggtcggtaggggtgtcctcgactcctgtggcgggctgggcgcagtgtgcgctaaccaaggtggccaggtgcacagtgtttcctccggcgcattggtgcggctggcttccgggttggatgtgcgctgtgttaagaatcagtgcggcttggttgggttgtgtatcggaggacgcacgactttcaaccttcgtctctcccgagcccgtacgggagttgtagcgatgagacaagatagtagctactacaacaattggataccacgaaattagggagaaaaaggggta

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU198372 True 430 lncRNA 0.42 1 66621575 66622004

Neighbor


gene id symbol gene type direction distance location
LOC110494316 NA coding downstream 34992 66582120 ~ 66586583 (-)
LOC110494195 LOC106560909 coding downstream 267037 66343630 ~ 66354538 (-)
LOC110494122 LOC106560915 coding downstream 321938 66277821 ~ 66299637 (-)
si:dkeyp-50b9.1 LOC106560918 coding downstream 398225 66210436 ~ 66223350 (-)
LOC110494064 NA coding downstream 475306 66144846 ~ 66146269 (-)
LOC110494333 LOC106560895 coding upstream 7555 66629559 ~ 66633818 (-)
LOC110533844 NA coding upstream 15149 66637153 ~ 66638202 (-)
LOC110494342 LOC106560894 coding upstream 19058 66641062 ~ 66643589 (-)
LOC110494363 klhl36 coding upstream 45870 66667874 ~ 66678769 (-)
LOC110494415 LOC106560887 coding upstream 113177 66735181 ~ 66774321 (-)
G174437 NA non-coding downstream 67663 66553555 ~ 66553912 (-)
G174436 NA non-coding downstream 68189 66553058 ~ 66553386 (-)
G174435 NA non-coding downstream 69219 66551894 ~ 66552356 (-)
G174434 NA non-coding downstream 74257 66546120 ~ 66547318 (-)
G174428 chmp1a non-coding downstream 76134 66537902 ~ 66545441 (-)
G174475 NA non-coding upstream 30527 66652531 ~ 66654391 (-)
G174508 NA non-coding upstream 73289 66695293 ~ 66695679 (-)
G174470 NA non-coding upstream 111233 66733237 ~ 66735127 (-)
G174580 NA non-coding upstream 229497 66851501 ~ 66851815 (-)
G174584 NA non-coding upstream 241697 66863701 ~ 66863937 (-)
G173696 LOC106560906 other downstream 230809 66375226 ~ 66390766 (-)
G173675 NA other downstream 283189 66335412 ~ 66338386 (-)
G173431 NA other downstream 699346 65921850 ~ 65922229 (-)
G173370 LOC106560927 other downstream 782501 65833341 ~ 65839074 (-)
G174505 NA other upstream 70404 66692408 ~ 66692850 (-)
G177487 NA other upstream 2969131 69591135 ~ 69591722 (-)
LOC110494902 LOC106560839 other upstream 3071605 69648833 ~ 69767366 (-)
LOC110501848 NA other upstream 3938518 70552263 ~ 70642587 (-)
fam169b fam169b other upstream 4147154 70769140 ~ 70773282 (-)

Expression



Co-expression Network