Gene
RNA
| Item | Value |
|---|---|
| gene id | G173888 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 66644299 ~ 66644534 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU197759 | True | 236 | lncRNA | 0.42 | 1 | 66644299 | 66644534 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| vps9d1 | LOC106560896 | coding | upstream | 32709 | 66586399 ~ 66611590 (+) |
| LOC110494295 | fanca | coding | upstream | 62648 | 66555547 ~ 66581651 (+) |
| LOC110494286 | LOC106560898 | coding | upstream | 91942 | 66549545 ~ 66552357 (+) |
| LOC110494278 | chmp1a | coding | upstream | 96971 | 66537955 ~ 66547328 (+) |
| LOC110494260 | LOC106560901 | coding | upstream | 114738 | 66508242 ~ 66529561 (+) |
| LOC110494358 | LOC106560893 | coding | downstream | 12310 | 66656844 ~ 66665610 (+) |
| LOC110494385 | cotl1 | coding | downstream | 33220 | 66677754 ~ 66688505 (+) |
| meak7 | tldc1 | coding | downstream | 60768 | 66705302 ~ 66711432 (+) |
| LOC110501804 | plcg2 | coding | downstream | 72652 | 66717186 ~ 66731976 (+) |
| foxl1 | LOC106560889 | coding | downstream | 180713 | 66825247 ~ 66828635 (+) |
| G173870 | NA | non-coding | upstream | 21719 | 66622344 ~ 66622580 (+) |
| G173869 | NA | non-coding | upstream | 22296 | 66621592 ~ 66622003 (+) |
| G173868 | NA | non-coding | upstream | 23024 | 66621040 ~ 66621275 (+) |
| G173840 | NA | non-coding | upstream | 26617 | 66615365 ~ 66617682 (+) |
| G173844 | NA | non-coding | upstream | 29098 | 66614373 ~ 66615201 (+) |
| G173889 | NA | non-coding | downstream | 885 | 66645419 ~ 66645625 (+) |
| G173890 | NA | non-coding | downstream | 1269 | 66645803 ~ 66646013 (+) |
| G173893 | NA | non-coding | downstream | 5268 | 66649802 ~ 66650216 (+) |
| G173885 | NA | non-coding | downstream | 33480 | 66678014 ~ 66678467 (+) |
| G173902 | NA | non-coding | downstream | 46472 | 66691006 ~ 66691283 (+) |
| LOC110494096 | LOC106561115 | other | upstream | 378276 | 66262594 ~ 66266024 (+) |
| G172639 | NA | other | upstream | 708166 | 65935596 ~ 65936133 (+) |
| jph3 | jph3 | other | upstream | 1003323 | 65593468 ~ 65648660 (+) |
| map1lc3b | map1lc3b | other | upstream | 1107512 | 65531126 ~ 65536787 (+) |
| G170150 | LOC106560975 | other | upstream | 2766066 | 63873248 ~ 63878233 (+) |
| G173938 | LOC106573687 | other | downstream | 97286 | 66741820 ~ 66742213 (+) |
| LOC110494451 | zfpm1 | other | downstream | 310990 | 66900017 ~ 66995521 (+) |
| LOC110494472 | utp4 | other | downstream | 594356 | 67232278 ~ 67239902 (+) |
| hsbp1b | LOC106561110 | other | downstream | 841629 | 67486128 ~ 67488205 (+) |
| G176612 | LOC100846954 | other | downstream | 2216304 | 68860838 ~ 68861368 (+) |
