G174475


Basic Information

Item Value
gene id G174475
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 66652531 ~ 66654391 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU198422
GCCTTACAGAAggcttacagtaccagtcaaaagtttggattcttcaatgtagccacccattgccttgatgacagctttgcacactcttggcattctctcaaccagcttcatgaggaatgaggaggtcccacatatgctgagcacttgttggctgcttttccttcactctgcggtccaacatatcccaaaccatctcaattgagttgaggtcgggtgattgtggaggccaggtcatctgacgcagcactccatcactatccttcttggtcaaatagcccttacacagcctggaggtgttttgggtcattgtcctgttgaaaaacaaatgacagtcctactaagcgcaaaccagatgggatggcgtattgctgcagaatgctgtagtagccatgttggttaaatgtgccttgaattctgaataaatcactgacagtgtcaccagaaaagcacccccacaccatcacactccctcctacatgcttcacggtgggaaccacacatgcgtaaatcatccattcacctactctgcgtctcacaaagacaccgggtttggaaccaaaaattgcaaatttggactcatcagaccaaaggacagatttccaccggtctaatgtctatttgtaaataaagagatcttctgttgaatctgacaattaatcttgatggttgtacagtcgtctcaaataaaactgtgaaggacctcggcgttactctggaccctgatctctcttttgacaaacatatcaagactgttttaaggacccctcctgtctcagcctccactatttatgctgcagtagtttatgtgtcggggggctagggtcagtctgttatatctggagtatttctcccatcttatccggtgtcctgtgtgaatttaagtatgctctctctaattctctctttttctctcttcctttctcaaattctctttctttctctctctcggaggacctgagccctaggaccatgcctcaggactacctggcatgatgactccttgctgtccccagtccacctggccgtgctgctgctccagtttcaactgttctgcctgcggctatggaaccctgacctgttcaccggacgtgctacctgtcccagacctgctgttttcaactctctagagacagcaggagcggtagagatactctgaatgatcggctatgaaaagccaactgacatttactcctgaggtgctgacctgttgcaccctcgacaaccacagtgattattattatttgaccctgctggccatctatgaacatttgaacatctttgccatgttctgttataatctccacccggcacagccagaagaggactggccacccctcatagcctggttcctctctaggtttcttcctaggttcttgcctttctagggagtttttcctagccaccgtgcttctacacctacattgcttgctgtttggtgtttttaggctgggtttctgtacagcactttgtgacataagctgatataagaagggctttataaatacatttgattgattgatatttctcatgtttcttggcccaagcaagtctcttcttattattggtgtcctttagtagtagtttccttgcagcaatttgaccatgatggttttgcaactgcacttgaagaaatgttcaaagttctttaaaatgttctgtattga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198422 True 1664 lncRNA 0.45 2 66652531 66654391

Neighbor

gene id symbol gene type direction distance location
LOC110494342 LOC106560894 coding downstream 8942 66641062 ~ 66643589 (-)
LOC110533844 NA coding downstream 14329 66637153 ~ 66638202 (-)
LOC110494333 LOC106560895 coding downstream 18713 66629559 ~ 66633818 (-)
LOC110494316 NA coding downstream 65948 66582120 ~ 66586583 (-)
LOC110494195 LOC106560909 coding downstream 297993 66343630 ~ 66354538 (-)
LOC110494363 klhl36 coding upstream 13483 66667874 ~ 66678769 (-)
LOC110494415 LOC106560887 coding upstream 80790 66735181 ~ 66774321 (-)
LOC110494421 LOC106560888 coding upstream 120843 66775234 ~ 66790323 (-)
ces3 LOC100380756 coding upstream 199915 66854306 ~ 66859005 (-)
LOC110494458 LOC106573692 coding upstream 433836 67088227 ~ 67113877 (-)
G174447 NA non-coding downstream 30527 66621575 ~ 66622004 (-)
G174437 NA non-coding downstream 98619 66553555 ~ 66553912 (-)
G174436 NA non-coding downstream 99145 66553058 ~ 66553386 (-)
G174435 NA non-coding downstream 100175 66551894 ~ 66552356 (-)
G174434 NA non-coding downstream 105213 66546120 ~ 66547318 (-)
G174508 NA non-coding upstream 40902 66695293 ~ 66695679 (-)
G174470 NA non-coding upstream 78846 66733237 ~ 66735127 (-)
G174580 NA non-coding upstream 197110 66851501 ~ 66851815 (-)
G174584 NA non-coding upstream 209310 66863701 ~ 66863937 (-)
G174586 NA non-coding upstream 214365 66868756 ~ 66869181 (-)
G173696 LOC106560906 other downstream 261765 66375226 ~ 66390766 (-)
G173675 NA other downstream 314145 66335412 ~ 66338386 (-)
LOC110494122 LOC106560915 other downstream 354217 66277821 ~ 66299637 (-)
G173431 NA other downstream 730302 65921850 ~ 65922229 (-)
G173370 LOC106560927 other downstream 813457 65833341 ~ 65839074 (-)
G174505 NA other upstream 38017 66692408 ~ 66692850 (-)
G177487 NA other upstream 2936744 69591135 ~ 69591722 (-)
LOC110494902 LOC106560839 other upstream 3039218 69648833 ~ 69767366 (-)
LOC110501848 NA other upstream 3906131 70552263 ~ 70642587 (-)
fam169b fam169b other upstream 4114767 70769140 ~ 70773282 (-)

Expression


Co-expression Network