G174470


Basic Information

Item Value
gene id G174470
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 66733237 ~ 66735127 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU198410
cctttgccttgatgacagcattggacactcttggcattctcttaaccagcttcatgaggaatgcttttccaaccgtcttgaagtagtccccacatattctgagcacttgttggctgcttatcCTTCACGCTGCGgtcccaactcatcccaaaccatctcaattgggttgaggtcgggtgattgtggaggtcatctgatgtagcactcatCACACCTttgtcaaatagtccttacacagcctggaggtgtgttggatcattgtcctgttgaaaaagaaataatagtcccactaagggtgaaccagatgggatggcgtatagctgcagaatgctgtggtagccatgctggttaagtgtgccttgaattctaaataaatcactgaccgtgtcaccagcaaagcaccatcacaccaccacctccatgcttcacggtggcaaccacacatgcggagatcatccgttcacctactctgcgtctcacgaagacacggcggttggaatcaAAATTCTCAAATGtggactcgtcagaccaaaggacagatttccaccagtctaatatccattgtcgtgtttcatggcccaagcaagtctcttattattagtgtccttcagtagtggtttctttgcagcaattcaaccatgaaggcctggtttgcgcaatctcctctgaacagatgtgtctgttacttgaactctgtgaagcatttatttgggctgcaaatgcattaaggaaagaaattccacaaatgtacttttcataaggcacacctgttaattgaaatgcattccaggtgactacctcatggggcagcaggtagcctagtagttagaacattgggccagtaaccgaaaggttgctagatcgagtccctgagctgacaaggtaaacatctgtcgttctgcccctgaacaaggaagttactaggccgacattgtaaataagaatttgttcttaactgacttgcctagttaaataaaggtcaaataaaatgaagctggttgagagaatgccaagtgtgtgcaaagctgtcatcaagggttgctactttgaagaatctaaaacatattttgatttagtttcacttttttttttttactacatgataccaaatctgttatttcatagtttggatgtctacaatgtacaatgtagaaaattgtatagaaaaaccattgaatgagtaggtgtccagacttttgactggtatatcagctgatgttttttttattttaactttatttttTACGATTTTGAATATGAAAAGGGTCAGATCACTAGCTCTGCAGTCGCCCTACCCCCTTTGTCCATGGGTTACCACGATGTTCTGATCGAAGCGCAATGATGAGCAGTACATGTCGTAGACCAGCGACTGAATCACCTTTGTGTGATTTACAGACCTTTTGTATTGCTGGAATACATTAGCTTGTGCACAAAATACTGTGTATAAAGATATGAACATAGTATGTATGTATGCCAGTGAGTTTACTGGTTACTGTACTGTTTGTACACTGGTGAGATACTGTGTGATAAGTAGAGAGAATCAATATGTGGAATTATTTTTTTGTAACCGTTGACAGAATCTGCTCTTGGACCATTTCTATTGATG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU198410 True 1606 lncRNA 0.41 2 66733237 66735127

Neighbor

gene id symbol gene type direction distance location
LOC110494363 klhl36 coding downstream 54468 66667874 ~ 66678769 (-)
LOC110494342 LOC106560894 coding downstream 89648 66641062 ~ 66643589 (-)
LOC110533844 NA coding downstream 95035 66637153 ~ 66638202 (-)
LOC110494333 LOC106560895 coding downstream 99419 66629559 ~ 66633818 (-)
LOC110494316 NA coding downstream 146654 66582120 ~ 66586583 (-)
LOC110494415 LOC106560887 coding upstream 54 66735181 ~ 66774321 (-)
LOC110494421 LOC106560888 coding upstream 40107 66775234 ~ 66790323 (-)
ces3 LOC100380756 coding upstream 119179 66854306 ~ 66859005 (-)
LOC110494458 LOC106573692 coding upstream 353100 67088227 ~ 67113877 (-)
chtf8 chtf8 coding upstream 494993 67230120 ~ 67232289 (-)
G174508 NA non-coding downstream 37558 66695293 ~ 66695679 (-)
G174475 NA non-coding downstream 78846 66652531 ~ 66654391 (-)
G174447 NA non-coding downstream 111233 66621575 ~ 66622004 (-)
G174437 NA non-coding downstream 179325 66553555 ~ 66553912 (-)
G174436 NA non-coding downstream 179851 66553058 ~ 66553386 (-)
G174580 NA non-coding upstream 116374 66851501 ~ 66851815 (-)
G174584 NA non-coding upstream 128574 66863701 ~ 66863937 (-)
G174586 NA non-coding upstream 133629 66868756 ~ 66869181 (-)
G174630 NA non-coding upstream 184626 66919753 ~ 66919999 (-)
G174632 NA non-coding upstream 186858 66921985 ~ 66922274 (-)
G174505 NA other downstream 40387 66692408 ~ 66692850 (-)
G173696 LOC106560906 other downstream 342471 66375226 ~ 66390766 (-)
G173675 NA other downstream 394851 66335412 ~ 66338386 (-)
LOC110494122 LOC106560915 other downstream 434923 66277821 ~ 66299637 (-)
G173431 NA other downstream 811008 65921850 ~ 65922229 (-)
G177487 NA other upstream 2856008 69591135 ~ 69591722 (-)
LOC110494902 LOC106560839 other upstream 2958482 69648833 ~ 69767366 (-)
LOC110501848 NA other upstream 3825395 70552263 ~ 70642587 (-)
fam169b fam169b other upstream 4034031 70769140 ~ 70773282 (-)
G179215 NA other upstream 4170245 70905372 ~ 70906254 (-)

Expression


Co-expression Network