Gene
RNA
| Item | Value |
|---|---|
| gene id | G174009 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 66869454 ~ 66869656 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU197903 | True | 203 | lncRNA | 0.52 | 1 | 66869454 | 66869656 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| foxl1 | LOC106560889 | coding | upstream | 40819 | 66825247 ~ 66828635 (+) |
| LOC110501804 | plcg2 | coding | upstream | 137478 | 66717186 ~ 66731976 (+) |
| meak7 | tldc1 | coding | upstream | 158022 | 66705302 ~ 66711432 (+) |
| LOC110494385 | cotl1 | coding | upstream | 180949 | 66677754 ~ 66688505 (+) |
| LOC110494358 | LOC106560893 | coding | upstream | 203844 | 66656844 ~ 66665610 (+) |
| LOC110494451 | zfpm1 | coding | downstream | 30361 | 66900017 ~ 66995521 (+) |
| LOC110494462 | zc3h18 | coding | downstream | 266286 | 67135942 ~ 67176522 (+) |
| il17c2 | il17c2 | coding | downstream | 308005 | 67177661 ~ 67180759 (+) |
| tango6 | tango6 | coding | downstream | 311444 | 67181100 ~ 67214348 (+) |
| has3 | has3 | coding | downstream | 347136 | 67216792 ~ 67230218 (+) |
| G173989 | NA | non-coding | upstream | 10530 | 66852207 ~ 66858924 (+) |
| G173915 | LOC106560887 | non-coding | upstream | 95200 | 66773472 ~ 66774254 (+) |
| G173923 | NA | non-coding | upstream | 134327 | 66733251 ~ 66735127 (+) |
| G173902 | NA | non-coding | upstream | 178171 | 66691006 ~ 66691283 (+) |
| G173885 | NA | non-coding | upstream | 190987 | 66678014 ~ 66678467 (+) |
| G174049 | NA | non-coding | downstream | 49123 | 66918779 ~ 66919002 (+) |
| G174051 | NA | non-coding | downstream | 50095 | 66919751 ~ 66919983 (+) |
| G174083 | NA | non-coding | downstream | 103339 | 66972995 ~ 66979049 (+) |
| G174150 | NA | non-coding | downstream | 212879 | 67082535 ~ 67082965 (+) |
| G173938 | LOC106573687 | other | upstream | 127241 | 66741820 ~ 66742213 (+) |
| LOC110494096 | LOC106561115 | other | upstream | 603431 | 66262594 ~ 66266024 (+) |
| G172639 | NA | other | upstream | 933321 | 65935596 ~ 65936133 (+) |
| jph3 | jph3 | other | upstream | 1228478 | 65593468 ~ 65648660 (+) |
| map1lc3b | map1lc3b | other | upstream | 1332667 | 65531126 ~ 65536787 (+) |
| LOC110494472 | utp4 | other | downstream | 369234 | 67232278 ~ 67239902 (+) |
| hsbp1b | LOC106561110 | other | downstream | 616507 | 67486128 ~ 67488205 (+) |
| G176612 | LOC100846954 | other | downstream | 1991182 | 68860838 ~ 68861368 (+) |
| G176725 | lonp2 | other | downstream | 2086607 | 68956263 ~ 68957886 (+) |
