G174083


Basic Information

Item Value
gene id G174083
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 66972995 ~ 66979049 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU197978
gtattcagaccctttactcaatactttgttgaagcacttttggaaGTGATTCTTGtgtatgaccctacaagcttggcacatctatatttggggagtttctcccattcttctttgcagattctctcaagctctgtcaggttggatggggagcgtcgctgcatagctattttcaggtctctagagatgttcgatcagttCAACTCCATGCTCAATACTGAAtactcagagctctatggacaattccttcgacctcatggcttggtttttgctctgacaggcactgtcaactgtgggaccttatgtagacaggtgtgtgcctttccaaatcatgtccaatcaattgaatttaccacaggtggacttcagtcaagttgtagaaacatcttaagga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU197978 True 391 lncRNA 0.43 2 66972995 66979049

Neighbor

gene id symbol gene type direction distance location
foxl1 LOC106560889 coding upstream 144360 66825247 ~ 66828635 (+)
LOC110501804 plcg2 coding upstream 241019 66717186 ~ 66731976 (+)
meak7 tldc1 coding upstream 261563 66705302 ~ 66711432 (+)
LOC110494385 cotl1 coding upstream 284490 66677754 ~ 66688505 (+)
LOC110494358 LOC106560893 coding upstream 307385 66656844 ~ 66665610 (+)
LOC110494462 zc3h18 coding downstream 156893 67135942 ~ 67176522 (+)
il17c2 il17c2 coding downstream 198612 67177661 ~ 67180759 (+)
tango6 tango6 coding downstream 202051 67181100 ~ 67214348 (+)
has3 has3 coding downstream 237743 67216792 ~ 67230218 (+)
LOC110494472 utp4 coding downstream 253229 67232278 ~ 67239902 (+)
G174051 NA non-coding upstream 53012 66919751 ~ 66919983 (+)
G174049 NA non-coding upstream 53993 66918779 ~ 66919002 (+)
G174009 NA non-coding upstream 103339 66869454 ~ 66869656 (+)
G173989 NA non-coding upstream 114071 66852207 ~ 66858924 (+)
G173915 LOC106560887 non-coding upstream 198741 66773472 ~ 66774254 (+)
LOC110494451 zfpm1 non-coding downstream 14568 66900017 ~ 66995521 (+)
G174150 NA non-coding downstream 103486 67082535 ~ 67082965 (+)
G174151 NA non-coding downstream 103923 67082972 ~ 67083335 (+)
G174155 NA non-coding downstream 108744 67087793 ~ 67088059 (+)
G173938 LOC106573687 other upstream 230782 66741820 ~ 66742213 (+)
LOC110494096 LOC106561115 other upstream 706972 66262594 ~ 66266024 (+)
G172639 NA other upstream 1036862 65935596 ~ 65936133 (+)
jph3 jph3 other upstream 1332019 65593468 ~ 65648660 (+)
hsbp1b LOC106561110 other downstream 507114 67486128 ~ 67488205 (+)
G176612 LOC100846954 other downstream 1881789 68860838 ~ 68861368 (+)
G176725 lonp2 other downstream 1977214 68956263 ~ 68957886 (+)
G177067 NA other downstream 2477509 69456558 ~ 69457433 (+)

Expression


Co-expression Network