Gene
RNA
| Item | Value |
|---|---|
| gene id | G174155 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 67087793 ~ 67088059 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: NACHT, LRR and PYD domains-containing protein 3-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU198052 | True | 267 | lncRNA | 0.37 | 1 | 67087793 | 67088059 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494451 | zfpm1 | coding | upstream | 92272 | 66900017 ~ 66995521 (+) |
| foxl1 | LOC106560889 | coding | upstream | 259158 | 66825247 ~ 66828635 (+) |
| LOC110501804 | plcg2 | coding | upstream | 355817 | 66717186 ~ 66731976 (+) |
| meak7 | tldc1 | coding | upstream | 376361 | 66705302 ~ 66711432 (+) |
| LOC110494385 | cotl1 | coding | upstream | 399288 | 66677754 ~ 66688505 (+) |
| LOC110494462 | zc3h18 | coding | downstream | 47883 | 67135942 ~ 67176522 (+) |
| il17c2 | il17c2 | coding | downstream | 89602 | 67177661 ~ 67180759 (+) |
| tango6 | tango6 | coding | downstream | 93041 | 67181100 ~ 67214348 (+) |
| has3 | has3 | coding | downstream | 128733 | 67216792 ~ 67230218 (+) |
| LOC110494472 | utp4 | coding | downstream | 144219 | 67232278 ~ 67239902 (+) |
| G174151 | NA | non-coding | upstream | 4458 | 67082972 ~ 67083335 (+) |
| G174150 | NA | non-coding | upstream | 4828 | 67082535 ~ 67082965 (+) |
| G174083 | NA | non-coding | upstream | 108744 | 66972995 ~ 66979049 (+) |
| G174051 | NA | non-coding | upstream | 167810 | 66919751 ~ 66919983 (+) |
| G174244 | NA | non-coding | downstream | 126594 | 67214653 ~ 67214887 (+) |
| G174254 | NA | non-coding | downstream | 147513 | 67235572 ~ 67236179 (+) |
| G174268 | NA | non-coding | downstream | 168894 | 67256953 ~ 67257215 (+) |
| G173938 | LOC106573687 | other | upstream | 345580 | 66741820 ~ 66742213 (+) |
| LOC110494096 | LOC106561115 | other | upstream | 821770 | 66262594 ~ 66266024 (+) |
| G172639 | NA | other | upstream | 1151660 | 65935596 ~ 65936133 (+) |
| jph3 | jph3 | other | upstream | 1446817 | 65593468 ~ 65648660 (+) |
| hsbp1b | LOC106561110 | other | downstream | 398104 | 67486128 ~ 67488205 (+) |
| G176612 | LOC100846954 | other | downstream | 1772779 | 68860838 ~ 68861368 (+) |
| G176725 | lonp2 | other | downstream | 1868204 | 68956263 ~ 68957886 (+) |
| G177067 | NA | other | downstream | 2368499 | 69456558 ~ 69457433 (+) |
