G174882



Basic Information


Item Value
gene id G174882
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 67264452 ~ 67264669 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU198848
GAAGGTTAATAAGGTGGAGGGTGAAAATGGTAGGTAGAGGCCTAGGTTAAAGGGGGGAAAGGATACTCCTCCAGCCCAGTGTGGatggctccctctctccctggggGTGGAAGAGCGGCACTGATTGGGGGAGGTCATGGGGAAATGTTCCTAATGAGTTGTGATTGGGCCAGCTGCAGGGGGTTAGGATAACGAGCTACAAGCACAAAGACCCTCCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU198848 True 218 lncRNA 0.55 1 67264452 67264669

Neighbor


gene id symbol gene type direction distance location
LOC110494484 wfdc1 coding downstream 13029 67240045 ~ 67251423 (-)
chtf8 chtf8 coding downstream 32163 67230120 ~ 67232289 (-)
LOC110494458 LOC106573692 coding downstream 150575 67088227 ~ 67113877 (-)
ces3 LOC100380756 coding downstream 405447 66854306 ~ 66859005 (-)
LOC110494421 LOC106560888 coding downstream 474129 66775234 ~ 66790323 (-)
si:dkey-246g23.4 LOC106560877 coding upstream 786 67265455 ~ 67281288 (-)
LOC110494509 LOC106560876 coding upstream 37531 67302200 ~ 67304139 (-)
LOC110501813 LOC106560876 coding upstream 84615 67349284 ~ 67354722 (-)
si:dkey-246g23.2 LOC106560875 coding upstream 138472 67403141 ~ 67486026 (-)
zgc:173742 LOC106560872 coding upstream 226760 67491429 ~ 67523791 (-)
G174814 NA non-coding downstream 35406 67228819 ~ 67229046 (-)
G174756 NA non-coding downstream 176431 67087801 ~ 67088021 (-)
G174755 NA non-coding downstream 176740 67087498 ~ 67087712 (-)
G174646 NA non-coding downstream 330234 66933999 ~ 66934218 (-)
G174640 NA non-coding downstream 334146 66930099 ~ 66930306 (-)
G174902 NA non-coding upstream 47956 67312625 ~ 67312845 (-)
G174903 NA non-coding upstream 50489 67315158 ~ 67315373 (-)
G174904 NA non-coding upstream 52054 67316723 ~ 67316986 (-)
G174933 NA non-coding upstream 100251 67364920 ~ 67365256 (-)
G174934 NA non-coding upstream 100619 67365288 ~ 67365488 (-)
G174505 NA other downstream 571602 66692408 ~ 66692850 (-)
G173696 LOC106560906 other downstream 873686 66375226 ~ 66390766 (-)
G173675 NA other downstream 926066 66335412 ~ 66338386 (-)
LOC110494122 LOC106560915 other downstream 966138 66277821 ~ 66299637 (-)
G173431 NA other downstream 1342223 65921850 ~ 65922229 (-)
G177487 NA other upstream 2326466 69591135 ~ 69591722 (-)
LOC110494902 LOC106560839 other upstream 2428940 69648833 ~ 69767366 (-)
LOC110501848 NA other upstream 3295853 70552263 ~ 70642587 (-)
fam169b fam169b other upstream 3504489 70769140 ~ 70773282 (-)
G179215 NA other upstream 3640703 70905372 ~ 70906254 (-)

Expression



Co-expression Network