G174327


Basic Information

Item Value
gene id G174327
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 67368154 ~ 67402620 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU198235
gggtctttcagcatgacaatgatcccaaacacaccgcccgggcaacgaaggagtggcttcgtaagaagcatttcaaggtcctggagtggcctagccagtctccagatctcaaccccataggaaatctttggagggagttgaaagtccgtgttgcccagcaacagccccaaaacatcactgctctagaggagatctgcatggaggaatgggccaaaaaaacagcaacagtgtgtgaaaaccttgtgaagacttccagaaaatgtttgacctctgtcattgccaacaaagggtatataacaaagtattgagataaacttttgttattgaccaaatacttattttccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU198235 True 346 lncRNA 0.60 2 67368154 67402620

Neighbor

gene id symbol gene type direction distance location
LOC110494472 utp4 coding upstream 128252 67232278 ~ 67239902 (+)
has3 has3 coding upstream 137936 67216792 ~ 67230218 (+)
tango6 tango6 coding upstream 153806 67181100 ~ 67214348 (+)
il17c2 il17c2 coding upstream 187395 67177661 ~ 67180759 (+)
LOC110494462 zc3h18 coding upstream 191632 67135942 ~ 67176522 (+)
hsbp1b LOC106561110 coding downstream 83508 67486128 ~ 67488205 (+)
LOC110494554 LOC106560874 coding downstream 121790 67524410 ~ 67536975 (+)
LOC110501822 znf423 coding downstream 1001039 68403659 ~ 68551466 (+)
si:ch211-212o1.2 LOC106560866 coding downstream 1151134 68553754 ~ 68592859 (+)
cbln1 cbln1 coding downstream 1242855 68645475 ~ 68653500 (+)
G174319 NA non-coding upstream 13645 67354078 ~ 67354509 (+)
G174273 NA non-coding upstream 104699 67263175 ~ 67263455 (+)
G174268 NA non-coding upstream 110939 67256953 ~ 67257215 (+)
G174254 NA non-coding upstream 131975 67235572 ~ 67236179 (+)
G174377 NA non-coding downstream 55936 67458556 ~ 67461685 (+)
G175062 NA non-coding downstream 156343 67558963 ~ 67559195 (+)
G175071 NA non-coding downstream 161435 67564055 ~ 67564635 (+)
G175078 NA non-coding downstream 171109 67573729 ~ 67573939 (+)
G175103 NA non-coding downstream 184940 67587560 ~ 67587920 (+)
LOC110494451 zfpm1 other upstream 395699 66900017 ~ 66995521 (+)
G173938 LOC106573687 other upstream 625941 66741820 ~ 66742213 (+)
LOC110494096 LOC106561115 other upstream 1102131 66262594 ~ 66266024 (+)
G172639 NA other upstream 1432021 65935596 ~ 65936133 (+)
G176612 LOC100846954 other downstream 1458218 68860838 ~ 68861368 (+)
G176725 lonp2 other downstream 1553643 68956263 ~ 68957886 (+)
G177067 NA other downstream 2053938 69456558 ~ 69457433 (+)
G177812 NA other downstream 2704666 70107286 ~ 70113440 (+)

Expression


Co-expression Network