Gene
RNA
| Item | Value |
|---|---|
| gene id | G176048 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 68302343 ~ 68302574 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU200052 | True | 232 | lncRNA | 0.49 | 1 | 68302343 | 68302574 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494554 | LOC106560874 | coding | upstream | 765368 | 67524410 ~ 67536975 (+) |
| hsbp1b | LOC106561110 | coding | upstream | 814138 | 67486128 ~ 67488205 (+) |
| LOC110494472 | utp4 | coding | upstream | 1062441 | 67232278 ~ 67239902 (+) |
| has3 | has3 | coding | upstream | 1072125 | 67216792 ~ 67230218 (+) |
| tango6 | tango6 | coding | upstream | 1087995 | 67181100 ~ 67214348 (+) |
| LOC110501822 | znf423 | coding | downstream | 101085 | 68403659 ~ 68551466 (+) |
| si:ch211-212o1.2 | LOC106560866 | coding | downstream | 251180 | 68553754 ~ 68592859 (+) |
| cbln1 | cbln1 | coding | downstream | 342901 | 68645475 ~ 68653500 (+) |
| LOC110494586 | n4bp1 | coding | downstream | 580595 | 68883169 ~ 68909472 (+) |
| siah1 | siah1 | coding | downstream | 618127 | 68920701 ~ 68947106 (+) |
| G176042 | NA | non-coding | upstream | 2863 | 68299276 ~ 68299480 (+) |
| G176040 | NA | non-coding | upstream | 3460 | 68298362 ~ 68298883 (+) |
| G176033 | NA | non-coding | upstream | 9108 | 68293030 ~ 68293235 (+) |
| G175160 | NA | non-coding | upstream | 640674 | 67661081 ~ 67661669 (+) |
| G175146 | NA | non-coding | upstream | 661706 | 67637530 ~ 67640637 (+) |
| G176049 | NA | non-coding | downstream | 159 | 68302733 ~ 68302998 (+) |
| G176068 | NA | non-coding | downstream | 12400 | 68314974 ~ 68315253 (+) |
| G176185 | NA | non-coding | downstream | 260363 | 68562937 ~ 68563330 (+) |
| G176332 | NA | non-coding | downstream | 290625 | 68593199 ~ 68593453 (+) |
| G176333 | NA | non-coding | downstream | 291943 | 68594517 ~ 68594721 (+) |
| LOC110494451 | zfpm1 | other | upstream | 1329888 | 66900017 ~ 66995521 (+) |
| G173938 | LOC106573687 | other | upstream | 1560130 | 66741820 ~ 66742213 (+) |
| LOC110494096 | LOC106561115 | other | upstream | 2036320 | 66262594 ~ 66266024 (+) |
| G176612 | LOC100846954 | other | downstream | 558264 | 68860838 ~ 68861368 (+) |
| G176725 | lonp2 | other | downstream | 653689 | 68956263 ~ 68957886 (+) |
| G177067 | NA | other | downstream | 1153984 | 69456558 ~ 69457433 (+) |
| G177812 | NA | other | downstream | 1804712 | 70107286 ~ 70113440 (+) |
| igf1ra | igf1r | other | downstream | 2492836 | 70794530 ~ 70905277 (+) |
