Gene
RNA
| Item | Value |
|---|---|
| gene id | G176185 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 68562937 ~ 68563330 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU200208 | False | 347 | lncRNA | 0.43 | 2 | 68562937 | 68563330 |
| TU200209 | True | 300 | lncRNA | 0.43 | 2 | 68562937 | 68563330 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501822 | znf423 | coding | upstream | 11471 | 68403659 ~ 68551466 (+) |
| LOC110494554 | LOC106560874 | coding | upstream | 1025962 | 67524410 ~ 67536975 (+) |
| hsbp1b | LOC106561110 | coding | upstream | 1074732 | 67486128 ~ 67488205 (+) |
| LOC110494472 | utp4 | coding | upstream | 1323035 | 67232278 ~ 67239902 (+) |
| has3 | has3 | coding | upstream | 1332719 | 67216792 ~ 67230218 (+) |
| cbln1 | cbln1 | coding | downstream | 82145 | 68645475 ~ 68653500 (+) |
| LOC110494586 | n4bp1 | coding | downstream | 319839 | 68883169 ~ 68909472 (+) |
| siah1 | siah1 | coding | downstream | 357371 | 68920701 ~ 68947106 (+) |
| LOC118941448 | LOC107672167 | coding | downstream | 400454 | 68963784 ~ 68968557 (+) |
| st3gal2 | st3gal2 | coding | downstream | 522023 | 69069631 ~ 69093075 (+) |
| G176068 | NA | non-coding | upstream | 247684 | 68314974 ~ 68315253 (+) |
| G176049 | NA | non-coding | upstream | 259939 | 68302733 ~ 68302998 (+) |
| G176048 | NA | non-coding | upstream | 260363 | 68302343 ~ 68302574 (+) |
| G176042 | NA | non-coding | upstream | 263457 | 68299276 ~ 68299480 (+) |
| G176040 | NA | non-coding | upstream | 264054 | 68298362 ~ 68298883 (+) |
| G176332 | NA | non-coding | downstream | 29869 | 68593199 ~ 68593453 (+) |
| G176333 | NA | non-coding | downstream | 31187 | 68594517 ~ 68594721 (+) |
| G176339 | NA | non-coding | downstream | 35258 | 68598588 ~ 68599116 (+) |
| G176351 | NA | non-coding | downstream | 43270 | 68606600 ~ 68606973 (+) |
| G176381 | NA | non-coding | downstream | 72930 | 68636260 ~ 68636466 (+) |
| LOC110494451 | zfpm1 | other | upstream | 1590482 | 66900017 ~ 66995521 (+) |
| G173938 | LOC106573687 | other | upstream | 1820724 | 66741820 ~ 66742213 (+) |
| LOC110494096 | LOC106561115 | other | upstream | 2296914 | 66262594 ~ 66266024 (+) |
| G176612 | LOC100846954 | other | downstream | 297508 | 68860838 ~ 68861368 (+) |
| G176725 | lonp2 | other | downstream | 392933 | 68956263 ~ 68957886 (+) |
| G177067 | NA | other | downstream | 893228 | 69456558 ~ 69457433 (+) |
| G177812 | NA | other | downstream | 1543956 | 70107286 ~ 70113440 (+) |
| igf1ra | igf1r | other | downstream | 2232080 | 70794530 ~ 70905277 (+) |
