G176468


Basic Information

Item Value
gene id G176468
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 68706820 ~ 68707022 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU200512
gtctctgacctcctccctataggctgtctcgtcgttgtcggtgatcaagcctaccactgttgtgtcgtcagcaaacttaatgatggtgttggagtcgtgcctggccatgcagtcgtgggtgaacagggagtacaggaggggactgagcacgcacccctggggagctccagtgttgaggatcagcatggcagatgtgttgctac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200512 True 203 lncRNA 0.56 1 68706820 68707022

Neighbor

gene id symbol gene type direction distance location
cbln1 cbln1 coding upstream 53320 68645475 ~ 68653500 (+)
si:ch211-212o1.2 LOC106560866 coding upstream 113961 68553754 ~ 68592859 (+)
LOC110501822 znf423 coding upstream 155354 68403659 ~ 68551466 (+)
LOC110494554 LOC106560874 coding upstream 1169845 67524410 ~ 67536975 (+)
hsbp1b LOC106561110 coding upstream 1218615 67486128 ~ 67488205 (+)
LOC110494586 n4bp1 coding downstream 176147 68883169 ~ 68909472 (+)
siah1 siah1 coding downstream 213679 68920701 ~ 68947106 (+)
LOC118941448 LOC107672167 coding downstream 256762 68963784 ~ 68968557 (+)
st3gal2 st3gal2 coding downstream 378331 69069631 ~ 69093075 (+)
exosc6 exosc6 coding downstream 405041 69112063 ~ 69113805 (+)
G176466 NA non-coding upstream 1972 68704508 ~ 68704848 (+)
G176462 NA non-coding upstream 6659 68699948 ~ 68700161 (+)
G176428 NA non-coding upstream 44435 68662175 ~ 68662385 (+)
G176421 NA non-coding upstream 48232 68658369 ~ 68658588 (+)
G176391 NA non-coding upstream 52288 68654274 ~ 68654532 (+)
G176481 NA non-coding downstream 14983 68722005 ~ 68722296 (+)
G176494 NA non-coding downstream 26548 68733570 ~ 68801279 (+)
G176534 NA non-coding downstream 89245 68796267 ~ 68796739 (+)
G176583 NA non-coding downstream 103788 68810810 ~ 68811228 (+)
G176717 lonp2 non-coding downstream 213723 68920745 ~ 68968053 (+)
LOC110494472 utp4 other upstream 1466924 67232278 ~ 67239902 (+)
LOC110494451 zfpm1 other upstream 1734365 66900017 ~ 66995521 (+)
G173938 LOC106573687 other upstream 1964607 66741820 ~ 66742213 (+)
LOC110494096 LOC106561115 other upstream 2440797 66262594 ~ 66266024 (+)
G176612 LOC100846954 other downstream 153816 68860838 ~ 68861368 (+)
G176725 lonp2 other downstream 249241 68956263 ~ 68957886 (+)
G177067 NA other downstream 749536 69456558 ~ 69457433 (+)
G177812 NA other downstream 1400264 70107286 ~ 70113440 (+)
igf1ra igf1r other downstream 2088388 70794530 ~ 70905277 (+)

Expression


Co-expression Network