Gene
RNA
| Item | Value |
|---|---|
| gene id | G176668 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 68861177 ~ 68861451 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transposase-like, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU200727 | True | 275 | lncRNA | 0.44 | 1 | 68861177 | 68861451 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cdh13 | LOC106560870 | coding | downstream | 668284 | 67666186 ~ 68192893 (-) |
| zgc:173742 | LOC106560872 | coding | downstream | 1337386 | 67491429 ~ 67523791 (-) |
| si:dkey-246g23.2 | LOC106560875 | coding | downstream | 1375151 | 67403141 ~ 67486026 (-) |
| LOC110501813 | LOC106560876 | coding | downstream | 1506455 | 67349284 ~ 67354722 (-) |
| LOC110494509 | LOC106560876 | coding | downstream | 1557038 | 67302200 ~ 67304139 (-) |
| lonp2 | lonp2 | coding | upstream | 89886 | 68951337 ~ 68977698 (-) |
| il34 | il-34 | coding | upstream | 118959 | 68980410 ~ 69003899 (-) |
| sf3b3 | sf3b3 | coding | upstream | 148399 | 69009850 ~ 69059398 (-) |
| aars1 | aars | coding | upstream | 235291 | 69096742 ~ 69111871 (-) |
| LOC110494649 | LOC106560856 | coding | upstream | 252329 | 69112267 ~ 69128035 (-) |
| G176664 | NA | non-coding | downstream | 4438 | 68856535 ~ 68856739 (-) |
| G176490 | NA | non-coding | downstream | 130293 | 68729840 ~ 68730884 (-) |
| G176451 | NA | non-coding | downstream | 171032 | 68689648 ~ 68690145 (-) |
| G176416 | NA | non-coding | downstream | 207701 | 68652226 ~ 68653476 (-) |
| G176410 | NA | non-coding | downstream | 223583 | 68637201 ~ 68637594 (-) |
| G176688 | NA | non-coding | upstream | 24488 | 68885939 ~ 68893690 (-) |
| G176712 | NA | non-coding | upstream | 53557 | 68915008 ~ 68915283 (-) |
| G177154 | NA | non-coding | upstream | 117528 | 68978979 ~ 68979457 (-) |
| G177192 | NA | non-coding | upstream | 187569 | 69049020 ~ 69106218 (-) |
| G174505 | NA | other | downstream | 2168327 | 66692408 ~ 66692850 (-) |
| G173696 | LOC106560906 | other | downstream | 2470411 | 66375226 ~ 66390766 (-) |
| G173675 | NA | other | downstream | 2522791 | 66335412 ~ 66338386 (-) |
| LOC110494122 | LOC106560915 | other | downstream | 2562863 | 66277821 ~ 66299637 (-) |
| G173431 | NA | other | downstream | 2938948 | 65921850 ~ 65922229 (-) |
| G177487 | NA | other | upstream | 729684 | 69591135 ~ 69591722 (-) |
| LOC110494902 | LOC106560839 | other | upstream | 832158 | 69648833 ~ 69767366 (-) |
| LOC110501848 | NA | other | upstream | 1699071 | 70552263 ~ 70642587 (-) |
| fam169b | fam169b | other | upstream | 1907707 | 70769140 ~ 70773282 (-) |
| G179215 | NA | other | upstream | 2043921 | 70905372 ~ 70906254 (-) |
