G176725 (lonp2)


Basic Information

Item Value
gene id G176725
gene name lonp2
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 68956263 ~ 68957886 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU200792
GGTTGGTCAGCTGGTAGGTCTTGGCATTGCTGCGCAGCCAGCTCATGGCCAGGTGGGCAGATTCCTTCATAACGTCACCCAGTTGTCCAGTCAGGGTCAGCTGGCCCTCACCCTCCATGCGGCTGGCCTCCACAAACATGATCTCCCCTCCCAGGGGGGTCCAGGCCAGGCCGACGGCCACGCCCGGCAGTGTCAGACGCTCCGACACCTCCATCTCAAAGACGTGCGGCCCCAGGATGTCTTTCAACGCGATGTGGTCGATGACGATGGGCATATCTGGGGGCGCTGCCATGTCTGCCGACACCCCGTCAGGCTCCTCTGCCCTCCGCCCTCGCTtcccctctgacacacacacacacacacacacacgcacacacgaggTCAGAGAGAATGAGAACATAGAAAGCAGGTGAGCAAATTAGAGATTAATAGAAATATTAGCAACAGCAAAAGTTC

Function

symbol description
lonp2 Predicted to enable ATP binding activity and peptidase activity. Predicted to be involved in protein processing and protein targeting to peroxisome. Predicted to act upstream of or within protein quality control for misfolded or incompletely synthesized proteins. Predicted to be located in peroxisome. Predicted to be active in peroxisomal matrix. Orthologous to human LONP2 (lon peptidase 2, peroxisomal).

NR:

description
lon protease homolog 2, peroxisomal isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU200792 True 456 TUCP 0.39 2 68956263 68957886
Loading

Neighbor

gene id symbol gene type direction distance location
siah1 siah1 coding upstream 9157 68920701 ~ 68947106 (+)
LOC110494586 n4bp1 coding upstream 46791 68883169 ~ 68909472 (+)
cbln1 cbln1 coding upstream 302763 68645475 ~ 68653500 (+)
si:ch211-212o1.2 LOC106560866 coding upstream 363404 68553754 ~ 68592859 (+)
LOC110501822 znf423 coding upstream 404797 68403659 ~ 68551466 (+)
LOC118941448 LOC107672167 coding downstream 5898 68963784 ~ 68968557 (+)
st3gal2 st3gal2 coding downstream 127467 69069631 ~ 69093075 (+)
exosc6 exosc6 coding downstream 154177 69112063 ~ 69113805 (+)
trnal-cag NA coding downstream 176897 69134783 ~ 69134865 (+)
psme3ip1 LOC106560853 coding downstream 208909 69166795 ~ 69176697 (+)
G176724 lonp2 non-coding upstream 3853 68951347 ~ 68952410 (+)
G176583 NA non-coding upstream 145035 68810810 ~ 68811228 (+)
G176494 NA non-coding upstream 154984 68733570 ~ 68801279 (+)
G176534 NA non-coding upstream 159524 68796267 ~ 68796739 (+)
G176481 NA non-coding upstream 233967 68722005 ~ 68722296 (+)
G176751 NA non-coding downstream 21154 68979040 ~ 68979298 (+)
G176752 NA non-coding downstream 23446 68981332 ~ 69003884 (+)
G176801 NA non-coding downstream 50512 69008398 ~ 69008682 (+)
G176779 NA non-coding downstream 157584 69115470 ~ 69116702 (+)
G176612 LOC100846954 other upstream 94895 68860838 ~ 68861368 (+)
hsbp1b LOC106561110 other upstream 1468062 67486128 ~ 67488205 (+)
LOC110494472 utp4 other upstream 1716367 67232278 ~ 67239902 (+)
LOC110494451 zfpm1 other upstream 1983808 66900017 ~ 66995521 (+)
G173938 LOC106573687 other upstream 2214050 66741820 ~ 66742213 (+)
G177067 NA other downstream 498672 69456558 ~ 69457433 (+)
G177812 NA other downstream 1149400 70107286 ~ 70113440 (+)
igf1ra igf1r other downstream 1837524 70794530 ~ 70905277 (+)
LOC110495604 LOC106573778 other downstream 3101831 72059717 ~ 72065199 (+)
LOC110533853 LOC106561194 other downstream 3295552 72250884 ~ 72253809 (+)

Expression

G176725(lonp2) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.
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G176725(lonp2) Expression in each Bioproject

Bar chart with 17 bars.
G176725(lonp2) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
End of interactive chart.

Co-expression Network