G177323


Basic Information

Item Value
gene id G177323
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 69326308 ~ 69326828 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU201446
GCAGTTTATAATTGGCAAAAATGCATCTTAAAATGCATCATTTTTCGGACATGCATGCGTTAACTCAAAGGAAAGCTTTTGTCgcatgtaaaaaaagaaaaaaaccgACCATGACGCATTAGATTTACATAGAATTGCCAGACTGTTGCATATTTGCATAATACAGGGAGCCCTATATTGAATGACAGCGTTTGTATTGTATCAGTATATGTGTACAAAGTATTATATCTACGCATCAGTCATCATACTTACCACAACATATGAAAGTCACCAAAGAGATTTATAGCGCAACTGCCAAACCCGGGAACATCTGGTTTCTGTATGAAAACTGCAGTCTCTGACAGTGCTGGGGTCCAACAAAAACGAAGTTtaaaatggagagagaaaaatacatagTGTATGGAGGGAGGCTCAGTAAGGTAAAGTTAACTTTTTGAAAAACGTGCAAAATTGGCAAGACAGCATTTTAACCGTATTCATTTCACTGGTCACGTGACACGTGTGGGAGTCGCTGGTCCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU201446 True 521 lncRNA 0.48 1 69326308 69326828

Neighbor

gene id symbol gene type direction distance location
nup93 nup93 coding downstream 17404 69276978 ~ 69308904 (-)
slc12a3 LOC106560848 coding downstream 51761 69266405 ~ 69274547 (-)
herpud1 herp1 coding downstream 60703 69251287 ~ 69265605 (-)
LOC110494745 LOC106560849 coding downstream 76026 69235656 ~ 69250282 (-)
nlrc5 LOC106560850 coding downstream 96753 69207423 ~ 69229555 (-)
LOC110494832 LOC106560845 coding upstream 4195 69331023 ~ 69342066 (-)
LOC110494854 LOC106560844 coding upstream 26834 69353662 ~ 69389693 (-)
gnao1a LOC106560843 coding upstream 84941 69411769 ~ 69549683 (-)
LOC110492400 NA coding upstream 251341 69578169 ~ 69584892 (-)
LOC110494902 LOC106560839 coding upstream 322005 69648833 ~ 69767366 (-)
G177322 NA non-coding downstream 48 69325550 ~ 69326260 (-)
G177315 NA non-coding downstream 6364 69319561 ~ 69319944 (-)
G177207 NA non-coding downstream 14599 69310511 ~ 69311709 (-)
G177272 NA non-coding downstream 130322 69195541 ~ 69195986 (-)
G177244 NA non-coding downstream 209145 69116867 ~ 69117163 (-)
G177333 NA non-coding upstream 38284 69365112 ~ 69365852 (-)
G177353 NA non-coding upstream 113019 69439847 ~ 69458295 (-)
G177428 NA non-coding upstream 215547 69542375 ~ 69542883 (-)
G177486 NA non-coding upstream 263839 69590667 ~ 69591051 (-)
G177834 NA non-coding upstream 303025 69629853 ~ 69638176 (-)
G174505 NA other downstream 2633458 66692408 ~ 66692850 (-)
G173696 LOC106560906 other downstream 2935542 66375226 ~ 66390766 (-)
G173675 NA other downstream 2987922 66335412 ~ 66338386 (-)
LOC110494122 LOC106560915 other downstream 3027994 66277821 ~ 66299637 (-)
G173431 NA other downstream 3404079 65921850 ~ 65922229 (-)
G177487 NA other upstream 264307 69591135 ~ 69591722 (-)
LOC110501848 NA other upstream 1233694 70552263 ~ 70642587 (-)
fam169b fam169b other upstream 1442330 70769140 ~ 70773282 (-)
G179215 NA other upstream 1578544 70905372 ~ 70906254 (-)

Expression


Co-expression Network