G177486



Basic Information


Item Value
gene id G177486
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 69590667 ~ 69591051 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU201625
gccagagacaattactcgatgccgacacatctttctagctgatttacacgcagaagctatgttgcgcttggtgatctctgactgtttcatcctaacatcgttggtgccgacatggataacaatatctctatactctctacactcgccagttttagctttagccagcaccatcttcagattagccttaacgtcggtagccctgccccctggtaaacagtgtatgatcgctggatgattcgttttaagtctaatactgcgggtaatggagtcgccaatgactagagttttcaatttgtcagagctaatggtgggaagcttcggcgtctcagaccccgtaacgggaggagtagagaccagagaagactcggcctctgactccgactcg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU201625 True 385 lncRNA 0.56 1 69590667 69591051

Neighbor


gene id symbol gene type direction distance location
LOC110492400 NA coding downstream 5775 69578169 ~ 69584892 (-)
gnao1a LOC106560843 coding downstream 40984 69411769 ~ 69549683 (-)
LOC110494854 LOC106560844 coding downstream 200974 69353662 ~ 69389693 (-)
LOC110494832 LOC106560845 coding downstream 248601 69331023 ~ 69342066 (-)
nup93 nup93 coding downstream 281763 69276978 ~ 69308904 (-)
LOC110494902 LOC106560839 coding upstream 57782 69648833 ~ 69767366 (-)
LOC110494926 LOC106560838 coding upstream 184876 69775927 ~ 69827479 (-)
LOC110501833 LOC106560836 coding upstream 243581 69834632 ~ 69870691 (-)
LOC110494911 LOC106560835 coding upstream 279750 69870801 ~ 69892079 (-)
trnav-aac NA coding upstream 340478 69931529 ~ 69931601 (-)
G177428 NA non-coding downstream 47784 69542375 ~ 69542883 (-)
G177353 NA non-coding downstream 132372 69439847 ~ 69458295 (-)
G177333 NA non-coding downstream 224815 69365112 ~ 69365852 (-)
G177323 NA non-coding downstream 263839 69326308 ~ 69326828 (-)
G177322 NA non-coding downstream 264407 69325550 ~ 69326260 (-)
G177834 NA non-coding upstream 38802 69629853 ~ 69638176 (-)
G177835 NA non-coding upstream 39883 69630934 ~ 69638886 (-)
G177837 NA non-coding upstream 43774 69634825 ~ 69642865 (-)
G177838 NA non-coding upstream 44505 69635556 ~ 69643319 (-)
G177841 NA non-coding upstream 67163 69658214 ~ 69658952 (-)
G174505 NA other downstream 2897817 66692408 ~ 66692850 (-)
G173696 LOC106560906 other downstream 3199901 66375226 ~ 66390766 (-)
G173675 NA other downstream 3252281 66335412 ~ 66338386 (-)
LOC110494122 LOC106560915 other downstream 3292353 66277821 ~ 66299637 (-)
G173431 NA other downstream 3668438 65921850 ~ 65922229 (-)
G177487 NA other upstream 84 69591135 ~ 69591722 (-)
LOC110501848 NA other upstream 969471 70552263 ~ 70642587 (-)
fam169b fam169b other upstream 1178107 70769140 ~ 70773282 (-)
G179215 NA other upstream 1314321 70905372 ~ 70906254 (-)

Expression



Co-expression Network