G177841


Basic Information

Item Value
gene id G177841
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 69658214 ~ 69658952 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU202028
gggaggagagaatgagggaaagagaaccacttggagggaggagagaatgaaGGAAAGAAAACTGGCTGGAGGGAGgagaatgagggaaagagaaCCAGCTGTAGGGATTagagaatgagggaaagagaaccagctggagggaggagagaatgagggaaagagaaccagttggagggaggagagaatgagggaaagagaaccagctggagggaggagagaatgagggaaagagatccagctggagggaggagagaatgagggaaagataaccagctggagggaggagagaatgaaGGAAAGAGAACcagttggagggaggagagaatgaaGGAAAGAGAACcagttggagggaggagagaatgagggaaagagaaccagttggagagaggagagaatgagggaaagagaaccagctggagggaggagagaatgagggaaagacaaccagctggagggaggagagaatgagggaaagagaaccagctggagggaggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU202028 True 496 lncRNA 0.52 2 69658214 69658952

Neighbor

gene id symbol gene type direction distance location
LOC110492400 NA coding downstream 73322 69578169 ~ 69584892 (-)
gnao1a LOC106560843 coding downstream 108531 69411769 ~ 69549683 (-)
LOC110494854 LOC106560844 coding downstream 268521 69353662 ~ 69389693 (-)
LOC110494832 LOC106560845 coding downstream 316148 69331023 ~ 69342066 (-)
nup93 nup93 coding downstream 349310 69276978 ~ 69308904 (-)
LOC110494926 LOC106560838 coding upstream 116975 69775927 ~ 69827479 (-)
LOC110501833 LOC106560836 coding upstream 175680 69834632 ~ 69870691 (-)
LOC110494911 LOC106560835 coding upstream 211849 69870801 ~ 69892079 (-)
trnav-aac NA coding upstream 272577 69931529 ~ 69931601 (-)
trnav-aac-2 NA coding upstream 276861 69935813 ~ 69935885 (-)
G177838 NA non-coding downstream 14895 69635556 ~ 69643319 (-)
G177837 NA non-coding downstream 15349 69634825 ~ 69642865 (-)
G177835 NA non-coding downstream 19328 69630934 ~ 69638886 (-)
G177834 NA non-coding downstream 20038 69629853 ~ 69638176 (-)
G177486 NA non-coding downstream 67163 69590667 ~ 69591051 (-)
G177851 NA non-coding upstream 17165 69676117 ~ 69676387 (-)
G177853 NA non-coding upstream 19647 69678599 ~ 69678931 (-)
G177855 NA non-coding upstream 21052 69680004 ~ 69680293 (-)
G177857 NA non-coding upstream 23095 69682047 ~ 69682328 (-)
G177859 NA non-coding upstream 27409 69686361 ~ 69687027 (-)
G177487 NA other downstream 66492 69591135 ~ 69591722 (-)
G174505 NA other downstream 2965364 66692408 ~ 66692850 (-)
G173696 LOC106560906 other downstream 3267448 66375226 ~ 66390766 (-)
G173675 NA other downstream 3319828 66335412 ~ 66338386 (-)
LOC110494122 LOC106560915 other downstream 3359900 66277821 ~ 66299637 (-)
LOC110494902 LOC106560839 other upstream 34657 69648833 ~ 69767366 (-)
LOC110501848 NA other upstream 901570 70552263 ~ 70642587 (-)
fam169b fam169b other upstream 1110206 70769140 ~ 70773282 (-)
G179215 NA other upstream 1246420 70905372 ~ 70906254 (-)
ttc23 ttc23 other upstream 1267738 70926632 ~ 70945359 (-)

Expression


Co-expression Network