G178074


Basic Information

Item Value
gene id G178074
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 70103142 ~ 70103632 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU202292
gttttgataaagtggaaaacttgatcctaggttttttattgccccatataaatttggtgatgctttggttagttgttttgaagaaggaaactgggagatagcatgggagcatctgaaataagtagtttagtctagggaggacgttcatacggattacattaattcttcctactaagctaattgggagggagatccaggtttggagatcgttcttgattcgatccaggagtggaagataattttccttaaaaaggctattcagatctggtgttatgaagatcccgaggtattgaaacccgtgtgttttccattggaaaggacaaagtgtcttcatagagctggtgagtgtaatattgagagggcagacagtggatttgttaaaattgatcttataacctgaaaacttgccatactgagcaattgtgtctaaaatgagagggagggatttctcagggttggatatgtagatcaagacatcatccgcgtaaagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU202292 True 491 lncRNA 0.40 1 70103142 70103632

Neighbor

gene id symbol gene type direction distance location
LOC110494967 LOC106560830 coding downstream 27517 69995090 ~ 70075625 (-)
zgc:152891 LOC106560831 coding downstream 122792 69960093 ~ 69980350 (-)
trnav-aac-6 NA coding downstream 150361 69952709 ~ 69952781 (-)
trnav-aac-5 NA coding downstream 154569 69948501 ~ 69948573 (-)
trnav-aac-4 NA coding downstream 158788 69944282 ~ 69944354 (-)
LOC118941470 LOC106560829 coding upstream 5545 70109177 ~ 70111705 (-)
zgc:158868 LOC106560829 coding upstream 8923 70112555 ~ 70115100 (-)
LOC118937291 NA coding upstream 71284 70174916 ~ 70176643 (-)
LOC110495034 LOC106560827 coding upstream 78864 70182496 ~ 70210312 (-)
LOC110495228 LOC106560819 coding upstream 299006 70402638 ~ 70546729 (-)
G178056 NA non-coding downstream 25635 70077177 ~ 70077507 (-)
G178005 NA non-coding downstream 157715 69927984 ~ 69945427 (-)
G177969 NA non-coding downstream 234345 69867581 ~ 69868797 (-)
G177925 NA non-coding downstream 239758 69831826 ~ 69863384 (-)
G177909 NA non-coding downstream 344157 69758619 ~ 69758985 (-)
G178075 NA non-coding upstream 1042 70104674 ~ 70104899 (-)
G178076 NA non-coding upstream 1722 70105354 ~ 70106158 (-)
G178077 NA non-coding upstream 2894 70106526 ~ 70106743 (-)
G178078 NA non-coding upstream 3349 70106981 ~ 70107239 (-)
G178088 NA non-coding upstream 19222 70122854 ~ 70123109 (-)
LOC110494902 LOC106560839 other downstream 398743 69648833 ~ 69767366 (-)
G177487 NA other downstream 511420 69591135 ~ 69591722 (-)
G174505 NA other downstream 3410292 66692408 ~ 66692850 (-)
G173696 LOC106560906 other downstream 3712376 66375226 ~ 66390766 (-)
G173675 NA other downstream 3764756 66335412 ~ 66338386 (-)
LOC110501848 NA other upstream 456890 70552263 ~ 70642587 (-)
fam169b fam169b other upstream 665526 70769140 ~ 70773282 (-)
G179215 NA other upstream 801740 70905372 ~ 70906254 (-)
ttc23 ttc23 other upstream 823058 70926632 ~ 70945359 (-)
G179310 mef2a other upstream 894413 70998045 ~ 71070204 (-)

Expression


Co-expression Network