G179134


Basic Information

Item Value
gene id G179134
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 70689253 ~ 70690634 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU203443
AAAAAGATGACCGTTCCAGTAGTTAAAAATCAGTGTCTAATTAGAACAAGCAGATGCCTCCACCAAAAGAAAGGAGTTCCAACTCCTTGGACCACATGGGGCCAGAGATCTGCAACCTCAACAGAGCAGGTGACTGAAAGGGTAAAACTTCTGACATGCTTTAGAATGTTTGGGGCCCTGCAGTCCATAATCTACAAGGTGGAACCCACCAGTAATCTTTCACAACACAAAGTAAAAGCCATAAGTCAGTGGTTGGCTTGAGCTTTCCATGGCCCATCAGAAATGTACACCACTCAAAGTCAGAGGGCAATCTTAAGGTGCATTACATTTGACTTTCAATGAAGGTGAAGCTCATGAGGGGGCATGTGTACAAGGCAATGCGCAAGTAGCAAAACTCCCTTCATGCTCCTGAAATTGAGTCAAAACAGTTCATACAGTATACTGTGTACAGCCCATAGATAAACATAGTTCAATTAAATGGTACAGCATTAGTGGGAGATGTGGCAGTTGATTGGCAGATGGTGGTCATCTGTTACAATAAATTACAACAGCAGAATAACATCCTTAGCACACATTGTGGCCAGTTGATAATCACAATCGTTGATTCCATGCAGCACATATCATCCCTCATAAAACAAGTGCCATGACTCCACTAGAATTACCTAGGCAGGTTCCACTGACAAAAGTTTTTCAGCACCTGATATCTTTTGGAAAGAAACTTTGTAAGATAATTATTAAATGATTCAGAGACGCGCATTTCAATAAAATTACCTGAAATAATTGTCTTAATCCTTATTACTTTGGTGTCCATGTTACAACCAACAGTTGAGCACAGTTCTTTTAGAGACAGGGTGTGTTCAAACTAAGTGAGAGGACTTGCTGCAATATAGACACGATTCTAAACTTGTGCTTTCATTGGGAAGTGTGATCTATAAGATATTTTGATGTCTGAGGGGGGATCAAAAAGATTCAAGAGTTccttgatttttttccccccagggAACCCACAATTTTTCCAGGGGACTCAAAATTAAAAGCCTAGTTAGATAGTCCAACATACAATATCTAGACAATGCCAACATAAATAACCCTATGGTATCTTTACTTGAGTATTTCCCTAAAGGAAAGCTGAGGAGAGAGTTAATTTTCATAAGGACGTATTTTTCTTGTCTGACTCTACCGCCCCTCTGTCCTGATGGTGACTACGGTGTGTGACTCCTGGTCAACCATCTCACTTGGTCACTGCATGTATACCTTGTGCAAGGTAACCCACGTTGCCAGAGGTGACACCAGCCATGGAGATACGCCCATCCTTTGTCATGTAGACGGAGAACTCCTTTGTAAGGCGC

Function

NR:

description
aspartate aminotransferase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU203443 True 1349 lncRNA 0.42 2 70689253 70690634

Neighbor

gene id symbol gene type direction distance location
LOC110501848 NA coding downstream 46666 70552263 ~ 70642587 (-)
LOC110495228 LOC106560819 coding downstream 142524 70402638 ~ 70546729 (-)
LOC118944152 NA coding downstream 148644 70540554 ~ 70540609 (-)
LOC110495034 LOC106560827 coding downstream 478941 70182496 ~ 70210312 (-)
LOC118937291 NA coding downstream 512610 70174916 ~ 70176643 (-)
chka LOC106560813 coding upstream 22555 70713189 ~ 70733880 (-)
kmt5b LOC106560809 coding upstream 43543 70734177 ~ 70741635 (-)
arpin arpin coding upstream 74911 70765545 ~ 70768009 (-)
fam169b fam169b coding upstream 78506 70769140 ~ 70773282 (-)
LOC118941475 NA coding upstream 83258 70773892 ~ 70775981 (-)
G179139 NA non-coding downstream 4028 70684916 ~ 70685225 (-)
G178485 NA non-coding downstream 299668 70389273 ~ 70389585 (-)
G178484 NA non-coding downstream 300351 70386034 ~ 70388902 (-)
G178483 NA non-coding downstream 303450 70385137 ~ 70385803 (-)
G178482 NA non-coding downstream 304139 70384774 ~ 70385114 (-)
G179141 NA non-coding upstream 956 70691590 ~ 70691865 (-)
G179178 NA non-coding upstream 87802 70778436 ~ 70778692 (-)
G179233 NA non-coding upstream 151686 70842320 ~ 70842577 (-)
G179235 NA non-coding upstream 157997 70848631 ~ 70848836 (-)
G179236 NA non-coding upstream 158952 70849586 ~ 70849967 (-)
LOC110494902 LOC106560839 other downstream 984854 69648833 ~ 69767366 (-)
G177487 NA other downstream 1097531 69591135 ~ 69591722 (-)
G174505 NA other downstream 3996403 66692408 ~ 66692850 (-)
G173696 LOC106560906 other downstream 4298487 66375226 ~ 66390766 (-)
G179215 NA other upstream 214738 70905372 ~ 70906254 (-)
ttc23 ttc23 other upstream 236056 70926632 ~ 70945359 (-)
G179310 mef2a other upstream 307411 70998045 ~ 71070204 (-)
LOC110495479 mctp2 other upstream 443900 71134265 ~ 71164057 (-)

Expression


Co-expression Network