G179320


Basic Information

Item Value
gene id G179320
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 71006689 ~ 71007918 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU203666
tttcatcagaccagaggacatttctccaaaaagtacgatctttgtccccaagtgCAGTTGTAAActatagtctgtcttttttatggcagttttggagcagtggcttcttccttgctgagtggcctttcaggttatgtcaatataggactcgttttactgtggatatggaaacttttgtacctgtttcctccagcatcttcacaaggtcctttgctgttgttctgggattgatttgcacttctcgcaccaaagtatgttcatctctaggagacagaatgcgtctccttcctgagtggtatgacggctacgtgatCCCATGGTTTTTtaaacttgcatactattgtttgtacagatgaatgtggtaccttcaggcgtttggaaattgctcccaatgatgaaccagacttgtggaggtctacatttttttctgaggtcttgactgatatcttttgattttcccatgatgtcaagcaaagaggcactgagtttgaaggtaggccttgaaatacatccacaggtacacctccaattgactaaaattatgtcaattagcctatcagaagcttctaaagctatgacataattttatggaaatttccaagccgtttaaaggcatagtcaacttagtgtatgtaaacttctgacctactggaattgtgatacagtgaattataagtgaaataatctgtctgtaaacaattgttggaaaaattacttgtgtcagatgtcctaaccaacttgcccaaactatagtttgttaacaagaaatttgtgagtggttgaaaaatgagtttgaatgactccaacctaagtgtatgtaagcttctgacttcaactgtatgtgagagtggattctcagccctcactagcatgaaaactaaatactggcacagactgtgtgtggaaaatgatttaagactgagactctctccaatacaacccaacattgcagagttatgtgcatcctttcaagcacaccattttcattaacctgtggtgagt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU203666 True 1002 lncRNA 0.39 2 71006689 71007918

Neighbor

gene id symbol gene type direction distance location
ttc23 ttc23 coding downstream 61330 70926632 ~ 70945359 (-)
LOC118941475 NA coding downstream 230708 70773892 ~ 70775981 (-)
fam169b fam169b coding downstream 233407 70769140 ~ 70773282 (-)
arpin arpin coding downstream 238680 70765545 ~ 70768009 (-)
kmt5b LOC106560809 coding downstream 265054 70734177 ~ 70741635 (-)
LOC118941478 NA coding upstream 96388 71104079 ~ 71105731 (-)
LOC110495479 mctp2 coding upstream 126347 71134265 ~ 71164057 (-)
LOC110495486 LOC105023478 coding upstream 414091 71422009 ~ 71432121 (-)
LOC110495580 LOC106561145 coding upstream 1004340 72012258 ~ 72050185 (-)
LOC100135856 LOC100135856 coding upstream 1062563 72070481 ~ 72090783 (-)
G179305 NA non-coding downstream 19331 70987098 ~ 70987358 (-)
G179216 NA non-coding downstream 101434 70903945 ~ 70905255 (-)
G179252 NA non-coding downstream 131520 70874750 ~ 70875169 (-)
G179249 NA non-coding downstream 135687 70870800 ~ 70871002 (-)
G179240 NA non-coding downstream 148181 70858300 ~ 70858508 (-)
G179311 mef2a non-coding upstream 71595 71079513 ~ 71093345 (-)
G179372 NA non-coding upstream 92601 71100519 ~ 71100755 (-)
G179373 NA non-coding upstream 92953 71100871 ~ 71101149 (-)
G179748 NA non-coding upstream 457271 71465189 ~ 71465424 (-)
G179215 NA other downstream 100435 70905372 ~ 70906254 (-)
LOC110501848 NA other downstream 445834 70552263 ~ 70642587 (-)
LOC110494902 LOC106560839 other downstream 1302290 69648833 ~ 69767366 (-)
G179754 NA other upstream 466454 71474372 ~ 71474979 (-)
G180716 NA other upstream 1103050 72110968 ~ 72111663 (-)
c2cd4a LOC106561196 other upstream 1864826 72833292 ~ 72877678 (-)
G182494 NA other upstream 2019466 73011478 ~ 73066724 (-)

Expression


Co-expression Network